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Protein Overview: RPK1_ARATH

General Information:
Name(s) found: RPK1_ARATH [Swiss-Prot]
Description(s) found:
Found 17 descriptions.
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  • Probable LRR receptor-like serine/threonine-protein kinase RPK1 OS=Arabidopsis thaliana GN=RPK1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 540 amino acids

    Gene Ontology:
    Cellular Component: plasma membrane [IDA]
    Biological Process: abscisic acid mediated signaling pathway [IMP]
    Molecular Function: receptor signaling protein serine/threonine kinase activity [ISS]
    protein binding [ISS]
    kinase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLLGLVFLL FNLFMFSFSR KLLTESGGGL HDEAALLKLK SSFLDPNGVL SSWVSDSSSN  60
   61 HCSWYGVSCN SDSRVVSLIL RGCDELEGSG VLHLPDLSSC SSSKRRLGGV ISPVVGDLSE 120
  121 IRVLSLSFND LRGEIPKEIW GLEKLEILDL KGNNFIGGIR VVDNVVLRKL MSFEDEDEIG 180
  181 PSSADDDSPG KSGLYPIEIA SIVSASVIVF VLLVLVILFI YTRKWKRNSQ VQVDEIKEIK 240
  241 VFVDIGIPLT YEIIVRATGY FSNSNCIGHG GFGSTYKAEV SPTNVFAVKR LSVGRFQGDQ 300
  301 QFHAEISALE MVRHPNLVML IGYHASETEM FLIYNYLSGG NLQDFIKERS KAAIEWKVLH 360
  361 KIALDVARAL SYLHEQCSPK VLHRDIKPSN ILLDNNYNAY LSDFGLSKLL GTSQSHVTTG 420
  421 VAGTFGYVAP EYAMTCRVSE KADVYSYGIV LLELISDKRA LDPSFSSHEN GFNIVSWAHM 480
  481 MLSQGKAKEV FTTGLWETGP PDDLVEVLHL ALKCTVDSLS IRPTMKQAVR LLKRIQPSRL 540
  541

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..229] PSI-BLAST 6.09691 Crystal structure of the dimeric protein core of decorin, the archetypal small leucine-rich repeat proteoglycan
    2 View Details [230..540] PSI-BLAST 64.69897 No description for 2qkwB was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • nucleic acid binding
    		•  1.98576551585076 bayes_pls_golite062009
  • binding
    		•  1.87302803330255 bayes_pls_golite062009
  • protein kinase activity
    		•  1.43632437878638 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  1.12585418084562 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  1.05564877695171 bayes_pls_golite062009
  • kinase activity
    		•  0.992330655560364 bayes_pls_golite062009
  • receptor activity
    		•  0.823142813332745 bayes_pls_golite062009
  • protein binding
    		•  0.646159692466759 bayes_pls_golite062009
  • transmembrane receptor activity
    		•  0.569410390698942 bayes_pls_golite062009
  • transferase activity
    		•  0.435331931559158 bayes_pls_golite062009
  • signal transducer activity
    		•  0.405945668463821 bayes_pls_golite062009
  • molecular transducer activity
    		•  0.405945668463821 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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