| Protein: | RPK1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 540 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RPK1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
370.0 | [0..12] | [534..69] |
|
Region A: Residues: [1-229] |
1 11 21 31 41 51
| | | | | |
1 MKLLGLVFLL FNLFMFSFSR KLLTESGGGL HDEAALLKLK SSFLDPNGVL SSWVSDSSSN 60
61 HCSWYGVSCN SDSRVVSLIL RGCDELEGSG VLHLPDLSSC SSSKRRLGGV ISPVVGDLSE 120
121 IRVLSLSFND LRGEIPKEIW GLEKLEILDL KGNNFIGGIR VVDNVVLRKL MSFEDEDEIG 180
181 PSSADDDSPG KSGLYPIEIA SIVSASVIVF VLLVLVILFI YTRKWKRNS
|
| Detection Method: |  |
| Confidence: | 6.09691 |
| Match: | 1xkuA |
| Description: | Crystal structure of the dimeric protein core of decorin, the archetypal small leucine-rich repeat proteoglycan |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| nucleic acid binding | 1.98576551585076 | bayes_pls_golite062009 |
| binding | 1.87302803330255 | bayes_pls_golite062009 |
| protein kinase activity | 1.43632437878638 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 1.12585418084562 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 1.05564877695171 | bayes_pls_golite062009 |
| kinase activity | 0.992330655560364 | bayes_pls_golite062009 |
| receptor activity | 0.823142813332745 | bayes_pls_golite062009 |
| protein binding | 0.646159692466759 | bayes_pls_golite062009 |
| transmembrane receptor activity | 0.569410390698942 | bayes_pls_golite062009 |
| transferase activity | 0.435331931559158 | bayes_pls_golite062009 |
| signal transducer activity | 0.405945668463821 | bayes_pls_golite062009 |
| molecular transducer activity | 0.405945668463821 | bayes_pls_golite062009 |
|
Region A: Residues: [230-540] |
1 11 21 31 41 51
| | | | | |
1 QVQVDEIKEI KVFVDIGIPL TYEIIVRATG YFSNSNCIGH GGFGSTYKAE VSPTNVFAVK 60
61 RLSVGRFQGD QQFHAEISAL EMVRHPNLVM LIGYHASETE MFLIYNYLSG GNLQDFIKER 120
121 SKAAIEWKVL HKIALDVARA LSYLHEQCSP KVLHRDIKPS NILLDNNYNA YLSDFGLSKL 180
181 LGTSQSHVTT GVAGTFGYVA PEYAMTCRVS EKADVYSYGI VLLELISDKR ALDPSFSSHE 240
241 NGFNIVSWAH MMLSQGKAKE VFTTGLWETG PPDDLVEVLH LALKCTVDSL SIRPTMKQAV 300
301 RLLKRIQPSR L
|
| Detection Method: | |
| Confidence: | 64.69897 |
| Match: | 2qkwB |
| Description: | No description for 2qkwB was found. |
