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Protein Overview: PERK1_ARATH

General Information:
Name(s) found: PERK1_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|9294050|dbj|BAB02007.1| protein kinase-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|30725474|gb|AAP37759.1| At3g24550 [Arabidopsis thaliana] [NCBI NR]
  • gi|22136228|gb|AAM91192.1| protein kinase-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|20260332|gb|AAM13064.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|16649063|gb|AAL24383.1| protein kinase-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15983765|gb|AAL10479.1| AT3g24550/MOB24_8 [Arabidopsis thaliana] [NCBI NR]
  • gi|15230130|ref|NP_189098.1| ATPERK1 (PROLINE EXTENSIN-LIKE RECEPTOR KINASE 1); ATP binding / protein kinase [Arabidopsis thaliana] [NCBI NR]
  • Proline-rich receptor-like protein kinase PERK1 OS=Arabidopsis thaliana GN=PERK1 PE=2 SV=1 [Swiss-Prot]
  • (Q9LV48) Protein kinase-like protein (AT3g24550/MOB24_8) (Hypothetical protein) (At3g24550) [athaliana3702.FASTAC.txt]
  • At3g24550 [Arabidopsis thaliana]gi|9294050|dbj|BAB02007.1| protein kinase-like protein [Arabidopsis thaliana]gi|22136228|gb|AAM91192.1| protein kinase-like protein [Arabidopsis thaliana]gi|20260332|gb|AAM13064.1| unknown protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Protein kinase family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ATPERK1 | ATPERK1 (PROLINE EXTENSIN-LIKE RECEPTOR KINASE 1); ATP binding / protein kinase | chr3:8960418-8963310 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • protein kinase-like protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • AT3g24550/MOB24_8 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • ATP binding / protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At3g24550 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ATPERK1, PERK1 | proline extensin-like receptor kinase 1 | chr3:8960411-8963303 FORWARD LENGTH=652 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Proline-rich receptor-like protein kinase PERK1 OS=Arabidopsis thaliana GN=PERK1 PE=1 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 652 amino acids

    Gene Ontology:
    Cellular Component: plasma membrane [IDA][ISS]
    Biological Process: response to wounding [ISS]
    response to fungus [ISS]
    protein amino acid phosphorylation [ISS]
    Molecular Function: ATP binding [ISS]
    protein kinase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTAPSPGTT PSPSPPSPPT NSTTTTPPPA ASSPPPTTTP SSPPPSPSTN STSPPPSSPL  60
   61 PPSLPPPSPP GSLTPPLPQP SPSAPITPSP PSPTTPSNPR SPPSPNQGPP NTPSGSTPRT 120
  121 PSNTKPSPPS DSSDGLSTGV VVGIAIGGVA ILVILTLICL LCKKKRRRRH DDEAAYYVPP 180
  181 PPPSGPKAGG PYGGQQQYWQ QQNASRPSDN HVVTSLPPPK PPSPPRKPPP PPPPPAFMSS 240
  241 SGGSDYSDLP VLPPPSPGLV LGFSKSTFTY EELSRATNGF SEANLLGQGG FGYVHKGILP 300
  301 SGKEVAVKQL KAGSGQGERE FQAEVEIISR VHHRHLVSLI GYCMAGVQRL LVYEFVPNNN 360
  361 LEFHLHGKGR PTMEWSTRLK IALGSAKGLS YLHEDCNPKI IHRDIKASNI LIDFKFEAKV 420
  421 ADFGLAKIAS DTNTHVSTRV MGTFGYLAPE YAASGKLTEK SDVFSFGVVL LELITGRRPV 480
  481 DANNVYVDDS LVDWARPLLN RASEEGDFEG LADSKMGNEY DREEMARMVA CAAACVRHSA 540
  541 RRRPRMSQIV RALEGNVSLS DLNEGMRPGH SNVYSSYGGS TDYDTSQYND DMIKFRKMAL 600
  601 GTQEYGTTGE YSNPTSDYGL YPSGSSSEGQ ATREMEMGKI KKTGQGYSGP SL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..149] FFAS03 1.26 No description for 2j63A was found.
    2 View Details [150..253] deduced N/A No confident structure predictions are available.
    3 View Details [254..566] PSI-BLAST 72.30103 No description for 2qkwB was found.
    4 View Details [567..652] PSI-BLAST 9.522879 EphB2 receptor

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3 No functions predicted.
    4
    Term Confidence Notes
  • binding
    		•  1.07186031271339 bayes_pls_golite062009
  • protein binding
    		•  0.761522661605732 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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