| Protein: | PERK1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 652 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PERK1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
391.0 | [0..107] | [652..107] |
|
Region A: Residues: [1-149] |
1 11 21 31 41 51
| | | | | |
1 MSTAPSPGTT PSPSPPSPPT NSTTTTPPPA ASSPPPTTTP SSPPPSPSTN STSPPPSSPL 60
61 PPSLPPPSPP GSLTPPLPQP SPSAPITPSP PSPTTPSNPR SPPSPNQGPP NTPSGSTPRT 120
121 PSNTKPSPPS DSSDGLSTGV VVGIAIGGV
|
| Detection Method: |  |
| Confidence: | 1.26 |
| Match: | 2j63A |
| Description: | No description for 2j63A was found. |
|
Region A: Residues: [150-253] |
1 11 21 31 41 51
| | | | | |
1 AILVILTLIC LLCKKKRRRR HDDEAAYYVP PPPPSGPKAG GPYGGQQQYW QQQNASRPSD 60
61 NHVVTSLPPP KPPSPPRKPP PPPPPPAFMS SSGGSDYSDL PVLP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [254-566] |
1 11 21 31 41 51
| | | | | |
1 PPSPGLVLGF SKSTFTYEEL SRATNGFSEA NLLGQGGFGY VHKGILPSGK EVAVKQLKAG 60
61 SGQGEREFQA EVEIISRVHH RHLVSLIGYC MAGVQRLLVY EFVPNNNLEF HLHGKGRPTM 120
121 EWSTRLKIAL GSAKGLSYLH EDCNPKIIHR DIKASNILID FKFEAKVADF GLAKIASDTN 180
181 THVSTRVMGT FGYLAPEYAA SGKLTEKSDV FSFGVVLLEL ITGRRPVDAN NVYVDDSLVD 240
241 WARPLLNRAS EEGDFEGLAD SKMGNEYDRE EMARMVACAA ACVRHSARRR PRMSQIVRAL 300
301 EGNVSLSDLN EGM
|
| Detection Method: | |
| Confidence: | 72.30103 |
| Match: | 2qkwB |
| Description: | No description for 2qkwB was found. |
|
Region A: Residues: [567-652] |
1 11 21 31 41 51
| | | | | |
1 RPGHSNVYSS YGGSTDYDTS QYNDDMIKFR KMALGTQEYG TTGEYSNPTS DYGLYPSGSS 60
61 SEGQATREME MGKIKKTGQG YSGPSL
|
| Detection Method: | |
| Confidence: | 9.522879 |
| Match: | 1b4fA |
| Description: | EphB2 receptor |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.07186031271339 | bayes_pls_golite062009 |
| protein binding | 0.761522661605732 | bayes_pls_golite062009 |
