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Protein Overview: gi|4006887, gi|4...

General Information:
Name(s) found: gi|7270634 [NCBI NR]
gi|42567473 [NCBI NR]
gi|4006887 [NCBI NR]
gi|25407768 [NCBI NR]
Description(s) found:
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  • gi|7270634|emb|CAB80351.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|42567473|ref|NP_568009.2| PQ-loop repeat family protein / transmembrane family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|4006887|emb|CAB16817.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • pir||B85435 hypothetical protein AT4g36850 [imported] - Arabidopsis thaliana [NCBI NR]
  • (O23198) Hypothetical protein [athaliana3702.FASTAC.txt]
  • putative protein [Arabidopsis thaliana]gi|7270634|emb|CAB80351.1| putative protein [Arabidopsis thaliana]gi|25407768|pir||B85435 hypothetical protein AT4g36850 [imported] - Arabidopsis thalianagi|42567473|ref|NP_568009.2| PQ-loop repeat family protein [nrdb_11152004_Chlamydomonas]
  • | Symbols: | PQ-loop repeat family protein / transmembrane family protein | chr4:17353418-17355824 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 374 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSLGYCLKE KKTCVRWVEI YFDDCLCNLN DDVSFALGIA SLLCWGVAEI PQVITNFRTK  60
   61 SSNGVSLSFL LAWVAGDIFN LVGCLLEPAT LPTQFYTALL YTVSTVVLVI QTIYYDYIYK 120
  121 LCRHRRTKIC QKDEEDEEKR PLKPPKTMGS AISIPGGSYK DSSRREFYYT SARSLAGSGT 180
  181 PPLRTSYFRV AKSGLRLWQS TMMVRHRTKM RQCRRAGFGT FLAASASLPL QAKSLAEKYA 240
  241 HASSRRLLNE RIVEHSALGQ WLGWLMAAIY MGGRIPQIWL NIKRGSVEGL NPLMFIFALV 300
  301 ANATYVGSIL VRTTEWDNIK PNLPWLLDAI VCVVLDLFII LQYIYYKYCR IKSLESREED 360
  361 AYGDYVEASK TFVS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..150] Pfam 25.0 No description for PF04193.5 was found. No confident structure predictions are available.
    2 View Details [151..237] deduced N/A No confident structure predictions are available.
    3 View Details [238..374] Pfam 19.60206 No description for PF04193.5 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle