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Protein Overview: CAF1D_ARATH

General Information:
Name(s) found: CAF1D_ARATH [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
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  • Putative CCR4-associated factor 1 homolog 4 OS=Arabidopsis thaliana GN=CAF1-4 PE=3 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 302 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    Biological Process: RNA modification [ISS]
    Molecular Function: nucleic acid binding [IEA]
    ribonuclease activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGEVWRWNKE VEMDSIRDCL KHFSSIAIDT EFPGCLKETP MDASEEIRYR DMKFNVDNTH  60
   61 LIQLGFTLFD RRGITKTWEI NLSDFNEHKC FKNDKSIAFL KSNGLNLDKI GEEGIGIEEF 120
  121 FRDFSQILKE KDGKITWVNF QGSYDNAYLV KGLTGGKPLP ETKEEFHETV EQLLGKFVFD 180
  181 VKKIAESCSG LSSRFGLQRI ADVLQMKRVG KAHHAGSDSE LTARVFTKLT FDLLNSRKQC 240
  241 VRRVDHQQYQ LEQQQLMMTR CYIPIPIPIP RPRSVMFAAH HPNPYFGGGY FGMPVQGRNY 300
  301 VL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..302] PSI-BLAST 82.69897 No description for 2p51A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle