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Protein Overview: gi|5123711, gi|7...

General Information:
Name(s) found: gi|7486861 [NCBI NR]
gi|7270445 [NCBI NR]
gi|5123711 [NCBI NR]
gi|15236222 [NCBI NR]
Description(s) found:
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  • pir||T10240 hypothetical protein T11I11.180 - Arabidopsis thaliana [NCBI NR]
  • gi|7270445|emb|CAB80211.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|5123711|emb|CAB45455.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15236222|ref|NP_195220.1| ARO1 (ARMADILLO REPEAT ONLY 1); binding [Arabidopsis thaliana] [NCBI NR]
  • (Q9SW41) Hypothetical protein [athaliana3702.FASTAC.txt]
  • putative protein [Arabidopsis thaliana]gi|5123711|emb|CAB45455.1| putative protein [Arabidopsis thaliana]gi|7486861|pir||T10240 hypothetical protein T11I11.180 - Arabidopsis thalianagi|15236222|ref|NP_195220.1| armadillo/beta-catenin repeat family prot [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Armadillo/beta-catenin repeat family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | armadillo/beta-catenin repeat family protein | chr4:16639765-16641759 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ARO1 | armadillo repeat only 1 | chr4:16639760-16641754 FORWARD LENGTH=664 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Armadillo repeat only 1 protein OS=Arabidopsis thaliana GN=T11I11.180 PE=4 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 664 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    cytoplasm [IDA]
    Biological Process: pollen tube growth [IMP]
    actin cytoskeleton organization [IMP]
    Molecular Function: binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADIVKQILV RPIQLADQIT KASDEAYSFR QECLEVKAKT EKLAGLLRQA ARASNDLYER  60
   61 PTRRIIDDTE QVLFKALALV EKCRATGLMK RVFTIIPAAA FRKITMQLEN SIGDVSWLLR 120
  121 VSASGDDRDD EYLGLPPIAA NEPILCLIWE QVAILFTGSL DDRSDAAASL VSLARDNDRY 180
  181 GRLIIEEGGV PSLLKLAKEG KMEGQENAAR AIGLLGRDPE SVEQIVNAGV CQVFAKILKE 240
  241 GHMKVQTVVA WAVSELASNH PKCQDHFAQN NIIRFLVSHL AFETVQEHSK YAIVSNKQTL 300
  301 SSIHTVVMAS NTNPADKKEN NEQDETKSNI SHPLSNQTPS QMHSLIANTL AMKGSGPSSG 360
  361 SGSGSGSGTN KNQIKQSNQQ HQNHTKGGSN PRGNNPTHVS LMGTSIKGRE YEDPATKAQM 420
  421 KAMAARALWQ LSRGNLQICR SITESRALLC FAVLLEKGDD EVKSYSALAM MEITDVAEQY 480
  481 PELRRSAFKP TSPAAKAVVE QLLKVIENEI LDLLIPCIKS IGSLSRTFRA TETRIIGPLV 540
  541 KLLDEREAEI AMEAAVALIK FSCTENFLRD NHSKAIIAAG GAKHLIQLVY FGEQMVQVPA 600
  601 LMLLCYIALN VPDSETLAQE EVLVVLEWST KQAHLVEAPT IDEILPEAKS RLELYQSRGS 660
  661 RGFH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..92] PSI-BLAST 58.0 No description for 2jdqA was found.
    2 View Details [93..664] PSI-BLAST 58.30103 beta-Catenin

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.373576425899935 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle