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View Structure Prediction Details

Protein: gi|5123711, gi|7...
Organism: Arabidopsis thaliana
Length: 664 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|5123711, gi|7....

Description E-value Query
Range
Subject
Range
gi|92894566 - gi|92894566|gb|ABE92291.1| IMP dehydrogenase/GMP reductase [Medicago truncatula]
304.0 [0..1] [664..1]

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Predicted Domain #1
Region A:
Residues: [1-92]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADIVKQILV RPIQLADQIT KASDEAYSFR QECLEVKAKT EKLAGLLRQA ARASNDLYER  60
   61 PTRRIIDDTE QVLFKALALV EKCRATGLMK RV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 58.0
Match: 2jdqA
Description: No description for 2jdqA was found.

Predicted Domain #2
Region A:
Residues: [93-664]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FTIIPAAAFR KITMQLENSI GDVSWLLRVS ASGDDRDDEY LGLPPIAANE PILCLIWEQV  60
   61 AILFTGSLDD RSDAAASLVS LARDNDRYGR LIIEEGGVPS LLKLAKEGKM EGQENAARAI 120
  121 GLLGRDPESV EQIVNAGVCQ VFAKILKEGH MKVQTVVAWA VSELASNHPK CQDHFAQNNI 180
  181 IRFLVSHLAF ETVQEHSKYA IVSNKQTLSS IHTVVMASNT NPADKKENNE QDETKSNISH 240
  241 PLSNQTPSQM HSLIANTLAM KGSGPSSGSG SGSGSGTNKN QIKQSNQQHQ NHTKGGSNPR 300
  301 GNNPTHVSLM GTSIKGREYE DPATKAQMKA MAARALWQLS RGNLQICRSI TESRALLCFA 360
  361 VLLEKGDDEV KSYSALAMME ITDVAEQYPE LRRSAFKPTS PAAKAVVEQL LKVIENEILD 420
  421 LLIPCIKSIG SLSRTFRATE TRIIGPLVKL LDEREAEIAM EAAVALIKFS CTENFLRDNH 480
  481 SKAIIAAGGA KHLIQLVYFG EQMVQVPALM LLCYIALNVP DSETLAQEEV LVVLEWSTKQ 540
  541 AHLVEAPTID EILPEAKSRL ELYQSRGSRG FH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 58.30103
Match: 1jpwA
Description: beta-Catenin
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.373576425899935 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle