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Protein Overview: gi|5738372, gi|7...

General Information:
Name(s) found: gi|7269087 [NCBI NR]
gi|5738372 [NCBI NR]
gi|25407585 [NCBI NR]
gi|15235641 [NCBI NR]
Description(s) found:
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  • gi|7269087|emb|CAB79196.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|5738372|emb|CAB52815.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • pir||F85256 hypothetical protein AT4g22410 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15235641|ref|NP_193972.1| ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis thaliana] [NCBI NR]
  • (Q9SUX8) Hypothetical protein [athaliana3702.FASTAC.txt]
  • putative protein [Arabidopsis thaliana]gi|5738372|emb|CAB52815.1| putative protein [Arabidopsis thaliana]gi|25407585|pir||F85256 hypothetical protein AT4g22410 [imported] - Arabidopsis thalianagi|15235641|ref|NP_193972.1| ubiquitin carboxyl-terminal hy [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Ubiquitin carboxyl-terminal hydrolase family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | ubiquitin carboxyl-terminal hydrolase family protein | chr4:11818225-11820147 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative protein [Arabidopsis thaliana] [NCBI-RefSeq_human_na_10-15-2008_con_reversed.fasta]
  • cysteine-type endopeptidase/ ubiquitin thiolesterase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Ubiquitin C-terminal hydrolases superfamily protein | chr4:11818213-11820135 REVERSE LENGTH=340 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Putative uncharacterized protein AT4g22410 OS=Arabidopsis thaliana GN=AT4g22410 PE=4 SV=1 [ARATH-contam.fasta]
  • Putative uncharacterized protein AT4g22410 OS=Arabidopsis thaliana GN=At4g22410 PE=4 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 340 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    intracellular [IEA]
    Biological Process: ubiquitin-dependent protein catabolic process [IEA][ISS]
    Molecular Function: zinc ion binding [IEA]
    ubiquitin thiolesterase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVEFQVLDFH FERFCSVSLS NLNVYACLVC GKYFQGRSQK SHAYTHSLEA GHHVYINLLT  60
   61 EKVYCLPDSY EINDPSLDDI RHVLNPRFSR AQVNELDKNR QWSRALDGSD YLPGMVGLNN 120
  121 IQKTEFVNVT IQSLMRVTPL RNFFHIPENY QHCKSPLVHC FGELTRKIWH ARNFKGQVSP 180
  181 HEFLQAVMKA SKKRFRIGQQ SDPVEFMSWL LNTLHMDLRT SKDASSIIHK CFQGELEVVK 240
  241 EFQGNENKEI SRMSFLMLGL DLPPPPLFKD VMEKNIIPQV ALFDLLKKFD GETVTEVVRP 300
  301 KLARMRYRVI KSPRYLMFHM VRFKKNNFFK EKNPTLGESV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..340] PSI-BLAST 30.69897 Crystal structure of HAUSP


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle