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View Structure Prediction Details

Protein: gi|5738372, gi|7...
Organism: Arabidopsis thaliana
Length: 340 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|5738372, gi|7....

Description E-value Query
Range
Subject
Range
gi|57098329 - gi|57098329|ref|XP_532977.1| PREDICTED: similar to ubiquitin specific protease 39 isoform 1 [Canis f...
224.0 [0..2] [339..107]

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Predicted Domain #1
Region A:
Residues: [1-340]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVEFQVLDFH FERFCSVSLS NLNVYACLVC GKYFQGRSQK SHAYTHSLEA GHHVYINLLT  60
   61 EKVYCLPDSY EINDPSLDDI RHVLNPRFSR AQVNELDKNR QWSRALDGSD YLPGMVGLNN 120
  121 IQKTEFVNVT IQSLMRVTPL RNFFHIPENY QHCKSPLVHC FGELTRKIWH ARNFKGQVSP 180
  181 HEFLQAVMKA SKKRFRIGQQ SDPVEFMSWL LNTLHMDLRT SKDASSIIHK CFQGELEVVK 240
  241 EFQGNENKEI SRMSFLMLGL DLPPPPLFKD VMEKNIIPQV ALFDLLKKFD GETVTEVVRP 300
  301 KLARMRYRVI KSPRYLMFHM VRFKKNNFFK EKNPTLGESV 

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Detection Method: PSI-BLAST
Confidence: 30.69897
Match: 2f1zA
Description: Crystal structure of HAUSP
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle