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Protein Overview: CAF1C_ARATH

General Information:
Name(s) found: CAF1C_ARATH [Swiss-Prot]
Description(s) found:
Found 15 descriptions.
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  • Putative CCR4-associated factor 1 homolog 3 OS=Arabidopsis thaliana GN=CAF1-3 PE=3 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 310 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    Biological Process: RNA modification [ISS]
    Molecular Function: nucleic acid binding [IEA]
    ribonuclease activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKQISSGEVW RWNKEVEMNS IRDCLKHCSS IAIDTEFPGC LKETPMDASE EIRYRDMKFN  60
   61 VDNTHLIQLG FTLFDRRGFA KTWEINLSDF DEHKCFKNDK SIAFLKSNGL NLDKIREEGI 120
  121 GIDEFFRDFS QILTEKDGKI TWVNFQGSYD NAYLVKGLTG GKPLPETKEE FHETVQQLLG 180
  181 KFVFDVKKIA ESCSGLSSQF GLQRIADVLQ MKRVGKAHHA GSDSELTARV FTKLTFDLLN 240
  241 SRKQSVRRVD HQQFQLEQQQ HQQFMMTRCY IPIPMPIPRP RPVMFAAHHQ NPYFGGGYFR 300
  301 MPVQGMNYVL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..310] PSI-BLAST 90.522879 No description for 2p51A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle