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Protein Overview: gi|15240035, gi|...

General Information:
Name(s) found: gi|9955559 [NCBI NR]
gi|15240035 [NCBI NR]
Description(s) found:
Found 11 descriptions.
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  • gi|9955559|emb|CAC05443.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15240035|ref|NP_196819.1| ATEXO70C1 (exocyst subunit EXO70 family protein C1); protein binding [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 653 amino acids

    Gene Ontology:
    Cellular Component: exocyst [IEA][ISS]
    Biological Process: vesicle docking during exocytosis [ISS]
    exocytosis [IEA]
    Molecular Function: protein binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKSGNHHHA NESSENHDHK SEDHENKQHS DELHSSTPES QSESSEHSLV EVMEAVVDFI  60
   61 QTLSSEKDPL GEISPAVESF PEAVDSLVSK MESSGLGRDE TEDSVFIDAV NRISKSVMRL 120
  121 RELKLDSTPV SSWLNRASSV QHRAVSLLDE EFRHLLDRSR EEEKKNNNNN NHHDGSNSDH 180
  181 NNSSTNDSDR CVLQDHEEAE EESFHDFSPE SISTLKKIAG AMISAGYEAE CCMSYEMSRR 240
  241 HAFKEELTEV GFEGINVEDV QRIGWESLEG EIASWISIVR RCSTVLFPGE LSLCNAVFPD 300
  301 QDHSSVRKRL FTGLVSAVTI RFLDFSGAVV LTKRSSEKLF KFLDMYETLR DLIPAVEQSD 360
  361 SDLIQEIKLA QTRLGEAAVT IFGELEKSIK SDNGRTPVPS GAVHPLTRYT MNYLKYACEY 420
  421 KETLDQVFQH YEANQTDNKP EPETKPRQQQ REDDEEYKVS AFARQMIRVM ELLDANLEIK 480
  481 SRLYRDPSLR FIFLMNNGRY ILQKIKGSIE IRDLMGQSWT RKRSTELRQY HKSYQRETWG 540
  541 KVLQCMNQEG LQVNGKVSKP VLKERFKIFN AMFDEIHKTQ STWIVSDEQM QSELRVSISS 600
  601 LVIPAYRSFF GRYKQHLDSG KQTDKYVKYQ PEDIESFIDD LFDGNPTSMA RKR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..71] FFAS03 1.05 Uroporphyrinogen decarboxylase, UROD
    2 View Details [72..653] PSI-BLAST 113.0 No description for 2pftA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle