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View Structure Prediction Details

Protein: gi|15240035, gi|...
Organism: Arabidopsis thaliana
Length: 653 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15240035, gi|....

Description E-value Query
Range
Subject
Range
E70A1_ARATH - Exocyst complex component EXO70A1 OS=Arabidopsis thaliana GN=EXO70A1 PE=1 SV=1
650.0 [0..26] [652..8]

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Predicted Domain #1
Region A:
Residues: [1-71]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKSGNHHHA NESSENHDHK SEDHENKQHS DELHSSTPES QSESSEHSLV EVMEAVVDFI  60
   61 QTLSSEKDPL G

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.05
Match: 1jpiA
Description: Uroporphyrinogen decarboxylase, UROD
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [72-653]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EISPAVESFP EAVDSLVSKM ESSGLGRDET EDSVFIDAVN RISKSVMRLR ELKLDSTPVS  60
   61 SWLNRASSVQ HRAVSLLDEE FRHLLDRSRE EEKKNNNNNN HHDGSNSDHN NSSTNDSDRC 120
  121 VLQDHEEAEE ESFHDFSPES ISTLKKIAGA MISAGYEAEC CMSYEMSRRH AFKEELTEVG 180
  181 FEGINVEDVQ RIGWESLEGE IASWISIVRR CSTVLFPGEL SLCNAVFPDQ DHSSVRKRLF 240
  241 TGLVSAVTIR FLDFSGAVVL TKRSSEKLFK FLDMYETLRD LIPAVEQSDS DLIQEIKLAQ 300
  301 TRLGEAAVTI FGELEKSIKS DNGRTPVPSG AVHPLTRYTM NYLKYACEYK ETLDQVFQHY 360
  361 EANQTDNKPE PETKPRQQQR EDDEEYKVSA FARQMIRVME LLDANLEIKS RLYRDPSLRF 420
  421 IFLMNNGRYI LQKIKGSIEI RDLMGQSWTR KRSTELRQYH KSYQRETWGK VLQCMNQEGL 480
  481 QVNGKVSKPV LKERFKIFNA MFDEIHKTQS TWIVSDEQMQ SELRVSISSL VIPAYRSFFG 540
  541 RYKQHLDSGK QTDKYVKYQP EDIESFIDDL FDGNPTSMAR KR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 113.0
Match: 2pftA
Description: No description for 2pftA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle