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Protein Overview: gi|6911869, gi|1...

General Information:
Name(s) found: gi|6911869 [NCBI NR]
gi|186511140 [NCBI NR]
gi|17979016 [NCBI NR]
gi|11357620 [NCBI NR]
Description(s) found:
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  • gi|6911869|emb|CAB72169.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|186511140|ref|NP_191258.2| EDA7 (embryo sac development arrest 7) [Arabidopsis thaliana] [NCBI NR]
  • gi|17979016|gb|AAL47467.1| AT3g56990/F24I3_70 [Arabidopsis thaliana] [NCBI NR]
  • pir||T47759 hypothetical protein F24I3.70 - Arabidopsis thaliana [NCBI NR]
  • (Q9M1J9) Hypothetical protein (AT3g56990/F24I3_70) [athaliana3702.FASTAC.txt]
  • putative protein [Arabidopsis thaliana]gi|17979016|gb|AAL47467.1| AT3g56990/F24I3_70 [Arabidopsis thaliana]gi|11357620|pir||T47759 hypothetical protein F24I3.70 - Arabidopsis thaliana [nrdb_11152004_Chlamydomonas]
  • | Symbols: EDA7 | EDA7 (embryo sac development arrest 7) | chr3:21099337-21102955 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • AT3g56990/F24I3_70 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: EDA7 | embryo sac development arrest 7 | chr3:21088358-21091976 REVERSE LENGTH=711 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • AT3g56990/F24I3_70 OS=Arabidopsis thaliana GN=F24I3.70 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 711 amino acids

    Gene Ontology:
    Cellular Component: nucleolus [IDA]
    CUL4 RING ubiquitin ligase complex [ISS]
    Biological Process: megagametogenesis [IMP]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSYGDRLKS TSINGVKLYN VSSAPNVPTW LNPKKQRALR KNPHYMQRVE LIQELKFETA  60
   61 TTRIKATPDG EYLIASGIYP PQVKVYELNQ LALKFERHLD SEIVDFEILD DDFSKLAFLC 120
  121 ADRSINLHAK YGKHHTLRIP RMGRDMTYDS WSCDLLCAAS SPDLYRINLE QGRFLSPLST 180
  181 QSPALNVVSR SNLHGLVACG GEDGAVEFFD MRMKSSAARI NAVTHGGDAA AEVTAIEFDD 240
  241 SEGLQVAVGS SAGKVFIYDL RTSTPIRVKD HMYESPILNI KWQRTLNTQQ PKLITTDKHI 300
  301 VRIWDPNTGE GMTSIEPTQG GINDICVFRG SGLMLLALDS SLIPSYFIPE LGPAPKWCSP 360
  361 LENLTEELEE SAQTTIYDNY KFLAMEDLEK LQLTHLIGTD LLKASMHGYF INYHLYKKAL 420
  421 AVIEPFAFDD YLERRKQEKL EEQRTQRITK KRRLPKVNRD LAARLHGDES EEENKTAEDG 480
  481 EATKKVLKKK KPILTDEHFV DGRFGSMFQN PDFQIDKDSY EYGVLHPVAS SKKQPSLLDE 540
  541 HFEAVSDDDE NSDSDASQPS DDEADDGDAT RPSKKARTPK LYEVKDERHA AAYHNRTSLA 600
  601 KEDSLPMGER VKAIENRRGN FGGSKDIKFG PGGSREFSFK ARGSSKYKED RDDEYEDGQR 660
  661 NKRRGVQSLG LKSTNIRGGF RGRGGGGFRG RGGGGSRGKG GRGGGRGRGR Q

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..347] PSI-BLAST 83.69897 No description for 3emhA was found.
    2 View Details [348..474] deduced N/A No confident structure predictions are available.
    3 View Details [475..711] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle