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Protein Overview: gi|110738154, gi...

General Information:
Name(s) found: gi|6822066 [NCBI NR]
gi|15232445 [NCBI NR]
gi|11357593 [NCBI NR]
gi|110738154 [NCBI NR]
Description(s) found:
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  • gi|6822066|emb|CAB70994.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15232445|ref|NP_190988.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • pir||T47579 hypothetical protein F24B22.160 - Arabidopsis thaliana [NCBI NR]
  • gi|110738154|dbj|BAF01008.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • (Q9M386) Hypothetical protein [athaliana3702.FASTAC.txt]
  • putative protein [Arabidopsis thaliana]gi|11357593|pir||T47579 hypothetical protein F24B22.160 - Arabidopsis thalianagi|15232445|ref|NP_190988.1| expressed protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Expressed protein, hin1 protein, Nicotiana tabacum, PIR:T03265 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G05975.1); similar to Harpin-induced 1 [Medicago truncatula] (GB:ABE93043.1); contains InterPro domain Harpin-induced 1 (InterPro:IPR010847) | chr3:20076709-20077416 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • hypothetical protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | chr3:20065731-20066438 FORWARD LENGTH=235 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Late embryogenesis abundant hydroxyproline-rich glycoprotein OS=Arabidopsis thaliana GN=F24B22.160 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 235 amino acids

    Gene Ontology:
    Cellular Component: plasma membrane [IDA]
    anchored to plasma membrane [IDA]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDFSIKPDD KKEEEKPATA MLPPPKPNAS SMETQSANTG TAKKLRRKRN CKICICFTIL  60
   61 LILLIAIVIV ILAFTLFKPK RPTTTIDSVT VDRLQASVNP LLLKVLLNLT LNVDLSLKNP 120
  121 NRIGFSYDSS SALLNYRGQV IGEAPLPANR IAARKTVPLN ITLTLMADRL LSETQLLSDV 180
  181 MAGVIPLNTF VKVTGKVTVL KIFKIKVQSS SSCDLSISVS DRNVTSQHCK YSTKL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..235] FFAS03 1.97 Solution structure of AT1g01470 from Arabidopsis Thaliana


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle