YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|110738154, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDFSIKPDD KKEEEKPATA MLPPPKPNAS SMETQSANTG TAKKLRRKRN CKICICFTIL  60
   61 LILLIAIVIV ILAFTLFKPK RPTTTIDSVT VDRLQASVNP LLLKVLLNLT LNVDLSLKNP 120
  121 NRIGFSYDSS SALLNYRGQV IGEAPLPANR IAARKTVPLN ITLTLMADRL LSETQLLSDV 180
  181 MAGVIPLNTF VKVTGKVTVL KIFKIKVQSS SSCDLSISVS DRNVTSQHCK YSTKL

Type	Start	End	Confidence
Cytoplasmic	1	52	0.99
Transmembrane Helix	53	76	0.93
Non-Cytoplasmic	77	235	0.98