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Protein Overview: SSL13_ARATH

General Information:
Name(s) found: SSL13_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|6996289|emb|CAB75450.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|42572733|ref|NP_974462.1| strictosidine synthase family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15231703|ref|NP_191512.1| strictosidine synthase family protein [Arabidopsis thaliana] [NCBI NR]
  • pir||T49294 hypothetical protein T16L24.80 - Arabidopsis thaliana [NCBI NR]
  • Protein STRICTOSIDINE SYNTHASE-LIKE 13 OS=Arabidopsis thaliana GN=SSL13 PE=1 SV=1 [Swiss-Prot]
  • (Q9M1B4) Hypothetical protein [athaliana3702.FASTAC.txt]
  • putative protein [Arabidopsis thaliana]gi|11358061|pir||T49294 hypothetical protein T16L24.80 - Arabidopsis thalianagi|15231703|ref|NP_191512.1| strictosidine synthase family protein [Arabidopsis thaliana]gi|42572733|ref|NP_974462.1| strictosidine synt [nrdb_11152004_Chlamydomonas]
  • | Symbols: | strictosidine synthase family protein | chr3:22004687-22006141 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • strictosidine synthase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: LAP3 | Calcium-dependent phosphotriesterase superfamily protein | chr3:21993710-21995164 FORWARD LENGTH=403 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Putative uncharacterized protein T16L24.80 OS=Arabidopsis thaliana GN=T16L24.80 PE=4 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 403 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: pollen exine formation [IMP]
    alkaloid biosynthetic process [ISS]
    Molecular Function: strictosidine synthase activity [ISS][TAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKKGQHGTY ESMMTHHPIL CIIALSVLFI AIDPFHMSPI GGREFKPVKH EVAPYKEVMG  60
   61 SWPRDNLSRL GNHGKLEFVD QVFGPESLEF DSLGRGPYTG LADGRVVRWM GEAIGWETFS 120
  121 VVTSKWSEEA CVRGVDSTTN KQWKHEKLCG RPLGLRFHKE TGNLYIADAY YGLLVVGPEG 180
  181 GIATPLATHV EGKPILFAND LDIHRNGSIF FTDTSKRYDR ANHFFILLEG ESTGRLLRYD 240
  241 PPTKTTHIVL EGLAFPNGIQ LSKDQSFLLF TETTNCRLVK YWLEGPKMGE VEVVADLPGF 300
  301 PDNVRINEEG QFWVAIDCCR TPAQEVLTNN PWIRSIYFRL PIPMKLLAKT MGMRMYTVIS 360
  361 RFDEEGKVLE VLEDRQGKVM KLWIGTVAHN HIATLPYPLT MNQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..403] PSI-BLAST 29.221849 No description for 2fpbA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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