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View Structure Prediction Details

Protein: SSL13_ARATH
Organism: Arabidopsis thaliana
Length: 403 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SSL13_ARATH.

Description E-value Query
Range
Subject
Range
gi|28973541, gi|... - gi|28973541|gb|AAO64095.1| putative strictosidine synthase [Arabidopsis thaliana], gi|28393615|gb|AA...
295.0 [0..1] [403..1]

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Predicted Domain #1
Region A:
Residues: [1-403]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKKGQHGTY ESMMTHHPIL CIIALSVLFI AIDPFHMSPI GGREFKPVKH EVAPYKEVMG  60
   61 SWPRDNLSRL GNHGKLEFVD QVFGPESLEF DSLGRGPYTG LADGRVVRWM GEAIGWETFS 120
  121 VVTSKWSEEA CVRGVDSTTN KQWKHEKLCG RPLGLRFHKE TGNLYIADAY YGLLVVGPEG 180
  181 GIATPLATHV EGKPILFAND LDIHRNGSIF FTDTSKRYDR ANHFFILLEG ESTGRLLRYD 240
  241 PPTKTTHIVL EGLAFPNGIQ LSKDQSFLLF TETTNCRLVK YWLEGPKMGE VEVVADLPGF 300
  301 PDNVRINEEG QFWVAIDCCR TPAQEVLTNN PWIRSIYFRL PIPMKLLAKT MGMRMYTVIS 360
  361 RFDEEGKVLE VLEDRQGKVM KLWIGTVAHN HIATLPYPLT MNQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 29.221849
Match: 2fpbA
Description: No description for 2fpbA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle