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Protein Overview: PUM23_ARATH

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

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[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..445] PSI-BLAST 87.69897 Pumilio 1
2 View Details [446..753] FFAS03 3.11 Pumilio 1

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • binding
  • 2.47395644967726 bayes_pls_golite062009
  • RNA binding
  • 1.93705682476038 bayes_pls_golite062009
  • nucleic acid binding
  • 1.64539435934931 bayes_pls_golite062009
  • protein binding
  • 1.50566694420704 bayes_pls_golite062009
  • transcription regulator activity
  • 1.06250847754412 bayes_pls_golite062009
  • cytoskeletal protein binding
  • 1.03835316513447 bayes_pls_golite062009
  • DNA binding
  • 0.946847037737779 bayes_pls_golite062009
  • transcription factor activity
  • 0.362911773502049 bayes_pls_golite062009
  • actin binding
  • 0.278432079866074 bayes_pls_golite062009
  • mRNA binding
  • 0.24761043632368 bayes_pls_golite062009
  • structural molecule activity
  • 0.175046841784998 bayes_pls_golite062009
    2
    Term Confidence Notes
  • binding
  • 2.36800795249393 bayes_pls_golite062009
  • RNA binding
  • 1.78069099517213 bayes_pls_golite062009
  • nucleic acid binding
  • 1.59410102249793 bayes_pls_golite062009
  • protein binding
  • 1.3800948965226 bayes_pls_golite062009
  • transcription regulator activity
  • 1.08645493064764 bayes_pls_golite062009
  • cytoskeletal protein binding
  • 0.999774819351011 bayes_pls_golite062009
  • DNA binding
  • 0.956143892328242 bayes_pls_golite062009
  • transcription factor activity
  • 0.371244009721798 bayes_pls_golite062009
  • actin binding
  • 0.258516930127328 bayes_pls_golite062009
  • structural molecule activity
  • 0.174654450621335 bayes_pls_golite062009
  • mRNA binding
  • 0.107084556647027 bayes_pls_golite062009




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle