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Protein Overview: AFP4_ARATH

General Information:
Name(s) found: AFP4_ARATH [Swiss-Prot]
Description(s) found:
Found 15 descriptions.
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  • Ninja-family protein AFP4 OS=Arabidopsis thaliana GN=AFP4 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 319 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    Biological Process: regulation of starch biosynthetic process [IMP]
    response to abscisic acid stimulus [IEP]
    response to salt stress [IEP]
    negative regulation of abscisic acid mediated signaling pathway [IMP]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEMIRGRGIP NGVVQVPNLS ANNLLQKFFI ASNHFCQRDS EHGENQQEAK KREDEAEEDE  60
   61 KDVELTLGLS LNGQFGTDPR SRKRRHFELG RSSSIPEGFV FDEQRSGGGN GGDMRRIVGR 120
  121 GGSDMFQLDR TRSLPVVTEM DIEKERKVSE KTRAFMESPV TNRGAYLTKD KNRGQAVETE 180
  181 KPRAFLEFKI PPTKEGKKEK DRLVVTGPVN GKGKNGNTAK KQKNNVENSG MEKARNILED 240
  241 MPCVSTRDVG ADGKRVEGFL YWYGGNKEEV KIVCVCHGSF LSPAEFVRHG GGTVSDDDGG 300
  301 DVMINPLRHI VVKLPSSSI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..186] MSA 1.013978 View MSA. No confident structure predictions are available.
    2 View Details [187..319] MSA 6.014972 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle