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View Structure Prediction Details

Protein: AFP4_ARATH
Organism: Arabidopsis thaliana
Length: 319 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AFP4_ARATH.

Description E-value Query
Range
Subject
Range
gi|9294131 - gi|9294131|dbj|BAB01982.1| unnamed protein product [Arabidopsis thaliana]
292.0 [0..49] [319..2]

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Predicted Domain #1
Region A:
Residues: [1-186]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEMIRGRGIP NGVVQVPNLS ANNLLQKFFI ASNHFCQRDS EHGENQQEAK KREDEAEEDE  60
   61 KDVELTLGLS LNGQFGTDPR SRKRRHFELG RSSSIPEGFV FDEQRSGGGN GGDMRRIVGR 120
  121 GGSDMFQLDR TRSLPVVTEM DIEKERKVSE KTRAFMESPV TNRGAYLTKD KNRGQAVETE 180
  181 KPRAFL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [187-319]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EFKIPPTKEG KKEKDRLVVT GPVNGKGKNG NTAKKQKNNV ENSGMEKARN ILEDMPCVST  60
   61 RDVGADGKRV EGFLYWYGGN KEEVKIVCVC HGSFLSPAEF VRHGGGTVSD DDGGDVMINP 120
  121 LRHIVVKLPS SSI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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