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Protein Overview: GBIS2_ARATH

General Information:
Name(s) found: GBIS2_ARATH [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
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  • (Z)-gamma-bisabolene synthase 2 OS=Arabidopsis thaliana GN=TPS13 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 471 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: sesquiterpenoid biosynthetic process [IDA]
    response to wounding [IEP]
    farnesyl diphosphate metabolic process [IDA]
    Molecular Function: cyclase activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESQTKFDYE SLAFTKLSHS QWTDYFLSVP IDDSELDAIT REIDIIKPEV RKLLSSKGDD  60
   61 ETSKRKVLLI QSLLSLGLAF HFENEIKDIL EDAFRRIDDI TGDENDLSTI SIMFRVFRTY 120
  121 GHNLPSSVFK RFTGDDGKFE RSLTEDAKGI LSLYEAAHLG TTTDYILDEA LEFTSSHLKS 180
  181 LLVGGMCRPH ILRLIRNTLY LPQRWNMEAV IAREYISFYE QEEDHDKMLL RLAKLNFKLL 240
  241 QLHYIKELKT FIKWWMELGL TSKWPSQFRE RIVEAWLAGL MMYFEPQFSG GRVIAAKFNY 300
  301 LLTILDDACD HYFSIPELTR LVDCVERWNH DGIHTLEDIS RIIFKLALDV FDDIGRGVRS 360
  361 KGCSYYLKEM LEELKILVRA NLDLVKWARG NQLPSFEEHV EVGGIALTTY ATLMYSFVGM 420
  421 GEAVGKEAYE WVRSRPRLIK SLAAKGRLMD DITDFEVKII NLFFDLLLFV F

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..471] PSI-BLAST 160.0 5-EPI-ARISTOLOCHENE SYNTHASE FROM NICOTIANA TABACUM

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.87397377711135 bayes_pls_golite062009
  • transferase activity
    		•  1.34929557841705 bayes_pls_golite062009
  • transferase activity, transferring alkyl or aryl (other than methyl) groups
    		•  1.22586398285056 bayes_pls_golite062009
  • prenyltransferase activity
    		•  0.302854173865421 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.87

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle