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Protein Overview: gi|30693041, gi|...

General Information:
Name(s) found: gi|7630034 [NCBI NR]
gi|30693041 [NCBI NR]
Description(s) found:
Found 8 descriptions.
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  • gi|7630034|emb|CAB88328.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|30693041|ref|NP_680117.2| EMB2423 (EMBRYO DEFECTIVE 2423) [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 1017 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: embryonic development ending in seed dormancy [NAS]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEGTKQERT LENNLLHKVG EAVSAISDAK HVDQVISAIH SVAVLLFPVD PSLFSGNFEM  60
   61 LHIVRGSGTF GLLMILYLGS AQVCSSVVPS ADERNEWLET FYRGVAFPTF ARVLLLDVAS 120
  121 DWLSCFPISV QKHLYDKFFL DGSVIEVVQV LVPFLHHVGD GGVNANSVQT NVERLLILCL 180
  181 LENDGVLKIT KEIGNIYQGH NSSNGSLKPL LSRLSQILTS IPDKARASCT EANCTVIVLS 240
  241 FVGEVFSRIC RRGLSDLLLS EVTPHVLAQV RRLLNSKIGA IEVDTFQLDP TTRIWSKTME 300
  301 AVTDPYAVEK MAEQLLHQLY AEHPSDVEAF WTIWTLFHRN VIHQASVRQA KCFLWQLDSF 360
  361 FRYPFFFFHF HPNAVKQCVL ECPPVTNTLA KGDVTQGLLE TTQRLASVWS KREFLQSVQL 420
  421 EQQAYLQFLF PVTDISDITA ALGLCLENMS REELDRTKDV MHSILQGVSC RLENPGDLVR 480
  481 KMASSIAFMF SKVIDPKNPL YLDDSITDNA IDWEFGLQTA SITNTMENGD GENKRSASLT 540
  541 EVNESSRRNK QKENRKSKNI SAFVLADPNE IVDLATLNCD TESDKDDGDD DASVSSDNSS 600
  601 VTSLEPYDLM DDDKDLGKQF THLVDVVGAL RKTDDADGVE KAIYVAEKLV RASPDELTHI 660
  661 AGDLARTLVQ VRCSDIAIEG EEDSAEEKRQ RALIALLVTR PFESLETLNN ILYSPNVDVS 720
  721 QRIMILDVMA EAARELANSK TLKPKHEARG PLISNISDPQ PWYLPSNAST PWKKVSETGS 780
  781 FHLNWANRFE RELQSKPGQT KKGKSRRWSL KSADRDQNST DWSQNRFPLY AAAFMLPAMK 840
  841 EFDKKRHGVD LLGRDFVVLG KLVHMLGVCM QCASMHPEAS ALAISLLDML QRREVCNHPE 900
  901 AYVRRAVLFA ASSVLVSLHP SYIVSTLVEG NLDLSRALEW IRTWALQIAD SDIDRDCYTM 960
  961 ALSCLQLHAE MALQTSRALE STGGSSSSSS IRPMNISLPS GISKLTSIKL PSSNVHL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..230] MSA 1.034962 View MSA. No confident structure predictions are available.
    2 View Details [231..326] deduced N/A No confident structure predictions are available.
    3 View Details [327..567] deduced N/A No confident structure predictions are available.
    4 View Details [568..764] Pfam 6.769551 No description for PF10193.1 was found. No confident structure predictions are available.
    5 View Details [765..854] deduced N/A No confident structure predictions are available.
    6 View Details [855..898] MSA 1.046996 View MSA. No confident structure predictions are available.
    7 View Details [899..1017] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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