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Protein Overview: SDC1_ARATH

General Information:
Name(s) found: SDC1_ARATH [Swiss-Prot]
Description(s) found:
Found 20 descriptions.
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  • Serine decarboxylase OS=Arabidopsis thaliana GN=SDC PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 482 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: embryonic development ending in seed dormancy [NAS]
    cellular amino acid metabolic process [ISS]
    Molecular Function: pyridoxal phosphate binding [IEA]
    catalytic activity [IEA]
    carboxy-lyase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVGSLESDQT LSMATLIEKL DILSDDFDPT AVVTEPLPPP VTNGIGADKG GGGGEREMVL  60
   61 GRNIHTTSLA VTEPEVNDEF TGDKEAYMAS VLARYRKTLV ERTKNHLGYP YNLDFDYGAL 120
  121 GQLQHFSINN LGDPFIESNY GVHSRPFEVG VLDWFARLWE IERDDYWGYI TNCGTEGNLH 180
  181 GILVGREMFP DGILYASRES HYSVFKAARM YRMECEKVDT LMSGEIDCDD LRKKLLANKD 240
  241 KPAILNVNIG TTVKGAVDDL DLVIKTLEEC GFSHDRFYIH CDGALFGLMM PFVKRAPKVT 300
  301 FNKPIGSVSV SGHKFVGCPM PCGVQITRME HIKVLSSNVE YLASRDATIM GSRNGHAPLF 360
  361 LWYTLNRKGY KGFQKEVQKC LRNAHYLKDR LREAGISAML NELSSTVVFE RPKDEEFVRR 420
  421 WQLACQGDIA HVVVMPSVTI EKLDNFLKDL VKHRLIWYED GSQPPCLASE VGTNNCICPA 480
  481 HK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..482] PSI-BLAST 58.221849 No description for 2okjA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle