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View Structure Prediction Details

Protein: SDC1_ARATH
Organism: Arabidopsis thaliana
Length: 482 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SDC1_ARATH.

Description E-value Query
Range
Subject
Range
NFS1 - Cysteine desulfurase involved in iron-sulfur cluster (Fe/S) biogenesis; required for the post-transc...
335.0 [0..5] [481..2]

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Predicted Domain #1
Region A:
Residues: [1-482]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVGSLESDQT LSMATLIEKL DILSDDFDPT AVVTEPLPPP VTNGIGADKG GGGGEREMVL  60
   61 GRNIHTTSLA VTEPEVNDEF TGDKEAYMAS VLARYRKTLV ERTKNHLGYP YNLDFDYGAL 120
  121 GQLQHFSINN LGDPFIESNY GVHSRPFEVG VLDWFARLWE IERDDYWGYI TNCGTEGNLH 180
  181 GILVGREMFP DGILYASRES HYSVFKAARM YRMECEKVDT LMSGEIDCDD LRKKLLANKD 240
  241 KPAILNVNIG TTVKGAVDDL DLVIKTLEEC GFSHDRFYIH CDGALFGLMM PFVKRAPKVT 300
  301 FNKPIGSVSV SGHKFVGCPM PCGVQITRME HIKVLSSNVE YLASRDATIM GSRNGHAPLF 360
  361 LWYTLNRKGY KGFQKEVQKC LRNAHYLKDR LREAGISAML NELSSTVVFE RPKDEEFVRR 420
  421 WQLACQGDIA HVVVMPSVTI EKLDNFLKDL VKHRLIWYED GSQPPCLASE VGTNNCICPA 480
  481 HK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 58.221849
Match: 2okjA
Description: No description for 2okjA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle