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Protein Overview: gi|8979722, gi|1...

General Information:
Name(s) found: gi|8979722 [NCBI NR]
gi|15238286 [NCBI NR]
gi|11358291 [NCBI NR]
Description(s) found:
Found 11 descriptions.
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  • gi|8979722|emb|CAB96843.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15238286|ref|NP_196649.1| tRNA synthetase-related / tRNA ligase-related [Arabidopsis thaliana] [NCBI NR]
  • pir||T50797 hypothetical protein T30N20_150 - Arabidopsis thaliana [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 309 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IEA]
    Biological Process: prolyl-tRNA aminoacylation [IEA]
    translation [IEA][ISS]
    Molecular Function: nucleotide binding [IEA]
    ATP binding [IEA][ISS]
    aminoacyl-tRNA ligase activity [IEA][ISS]
    proline-tRNA ligase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKETRLGIT AKKDEDFGKW YSEACRFGEL VEYYESVKGC YILKPSGISD EYLERYTNTT  60
   61 LKGLLQRLLG LQELVDKRTQ GPPFEAACMT HGDDKGLVFP PKVAPVQVVV IHVPIKGAAD 120
  121 YQELCDACEA VESTLLGAGI RAEADIRDNY SCGWKYADQE LTGVPLRIET GPRDLANDQV 180
  181 RIVTRDNGAK MDVKRGDLIE QVKDLLEKIQ SNLYDVAKRK VEECTQKVET WDEFVEALSQ 240
  241 KKLILAPWCD KVEVEKDVKR RTRGDETGGG GGGAKTLCTP LEQPELGEET LCFASGKPAK 300
  301 KWSYWGRSY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..309] PSI-BLAST 73.09691 Prolyl-tRNA synthetase (ProRS) domain; C-terminal domain of ProRS; Prolyl-tRNA synthetase (ProRS)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.372436499192166 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle