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Protein Overview: YMG12_ARATH

General Information:
Name(s) found: YMG12_ARATH [Swiss-Prot]
Description(s) found:
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  • pir||T02900 hypothetical protein T13J8.100 - Arabidopsis thaliana [NCBI NR]
  • gi|7269653|emb|CAB79601.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|4455358|emb|CAB36768.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15234345|ref|NP_194528.1| YGGT family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|110741138|dbj|BAE98662.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • YlmG homolog protein 1-2, chloroplastic OS=Arabidopsis thaliana GN=YLMG1-2 PE=2 SV=1 [Swiss-Prot]
  • (Q9SUE0) Hypothetical protein [athaliana3702.FASTAC.txt]
  • putative protein [Arabidopsis thaliana]gi|4455358|emb|CAB36768.1| putative protein [Arabidopsis thaliana]gi|7486950|pir||T02900 hypothetical protein T13J8.100 - Arabidopsis thalianagi|15234345|ref|NP_194528.1| YGGT family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 YGGT family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | YGGT family protein | chr4:13923997-13924653 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • hypothetical protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: YLMG1-2, ATYLMG1-2 | YGGT family protein | chr4:13923991-13924647 REVERSE LENGTH=218 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Putative uncharacterized protein AT4g27990 OS=Arabidopsis thaliana GN=T13J8.100 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 218 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    chloroplast envelope [IDA]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASFTTNSLA LRASILANPR LPPPIIRPRL SLPRKLSFNL SLHNARTIVS SAVTSSSPVL  60
   61 SSKPPSQFPF SDSTRSITTL VLLAGVVIKS LIQKLSVAIV NLSPQIQASF RTASPLFFAS 120
  121 LRDRPAGYLN TPLTVVAAGL SKWLDIYSGV LMVRVLLSWF PNIPWDRQPL SAIRDLCDPY 180
  181 LNLFRNIIPP VFDTLDVSPL LAFAVLGTLG SILNNSRG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..128] MSA 1.067988 View MSA. No confident structure predictions are available.
    2 View Details [129..218] Pfam 32.387216 No description for PF02325.8 was found. Confident ab initio structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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