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Protein Overview: DCP5_ARATH

General Information:
Name(s) found: DCP5_ARATH [Swiss-Prot]
Description(s) found:
Found 10 descriptions.
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  • Protein decapping 5 OS=Arabidopsis thaliana GN=DCP5 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 611 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: deadenylation-independent decapping of nuclear-transcribed mRNA [IMP]
    cytoplasmic mRNA processing body assembly [IMP]
    negative regulation of translation [IMP]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAADNTGSKS SSAADSYVGS LISLTSKSEI RYEGILYNIN TDESSIGLQN VRSFGTEGRK  60
   61 KDGPQVPPSD KVYEYILFRG TDIKDLQVKA SPPVQPPAST INNDPAIIQS HYPSPMPTSG 120
  121 SLPSTASGSL PDISSHNGQP GQHGMGFQNA MPLYQPGGNL GSWGASPQPP MYWQGFYTPP 180
  181 PNGLPQLHQQ SLIRPPHGLP MPNSLQQPLQ YPNFNTPPPP TGSSSLQGSS LPEAPSSLFP 240
  241 FSTSSQMLAP SSLPFPGLPP VTLSSSLQST LQSAPSPSLA SEMAPPLLSN KAPITAPPTL 300
  301 PQDTNLLSFS LSTTRATEAS TGLPLSNKPS VVTGPISPPQ TTPLTSAPVA GVSSSISQDK 360
  361 PKPLLVTPGQ LLQSGSSAVS LSPPSTNADK DVEVVQVSSS AGLEQSVPVT SEAQPPILPL 420
  421 PSSARPTQKP NGHSFPNHNG YRGRGRGRGR GAGRSHQVMK FTEDFDFTAM NEKFNKDEVW 480
  481 GHLGKSTTLD GDEDDDSPTV DEAELPKIEA KPVYNKDDFF DSLSSNTIDR ESQNSRPRFS 540
  541 EQRKLDTETF GEFSRFRGGR GGRGGYGRNN GYSRGGYGGR GYGGYGGRGG GGGGYGYGGR 600
  601 GQGRGVSNRT T

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..101] PSI-BLAST 21.39794 NMR Solution Structure of protein from Zebra Fish Dr.13312
    2 View Details [102..283] PSI-BLAST 6.221849 Sec24
    3 View Details [284..462] MSA 4.260993 View MSA. No confident structure predictions are available.
    4 View Details [463..611] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle