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Protein Overview: gi|15227985, gi|...

General Information:
Name(s) found: gi|4512682 [NCBI NR]
gi|25370821 [NCBI NR]
gi|20198081 [NCBI NR]
gi|15227985 [NCBI NR]
Description(s) found:
Found 8 descriptions.
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  • gi|4512682|gb|AAD21736.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • pir||B84857 hypothetical protein At2g42700 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|20198081|gb|AAM15390.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15227985|ref|NP_181798.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 788 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: vesicle-mediated transport [IEA]
    vesicle docking during exocytosis [IEA]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALIDVAISC LNSIREIEED VKDAIVYIDA GCTESFQFVG AFPLFLELGA RAVCSLENMT  60
   61 SLDAVADWNS KSDCAKRIVI MTSRLLNDAH RYMLRCLSTH EGPDAYREYE TLLVQDYNEH 120
  121 TKKSDKISKD KGVSKFSSAL ESLTMEPIES ENVDISSGGA QGSVAEASLS RQHEDSLSFG 180
  181 LPPISTGSMS DTDDVPPGAT LTAHFLYQLA LKMELKLEIF SLGDQSKNVG KILTDMSSVY 240
  241 DVARRKRSAG LLLVDRTLDL ITPCCHGDSL FDRIFSSLPR AERFSSQAQL KQGVPSINRP 300
  301 SLDVQVPLGE LLNEEPSKIR DSGLPEGIEA FLRGWDSYTS APQNVGLFNE CDKKSTTNWT 360
  361 ELLNGSLVAT ECFRGTPYLE AMIDRKTKDG SVLVKKWLQE ALRRENISVN VRARPGYATK 420
  421 PELQAMIKAL SQSQSSLLKN KGIIQLGAAT AAALDESQSA KWDTFSSAEM MLNVSAGDTS 480
  481 QGLAAQISDL INKSAVAELQ AKKNEKPDSS SRGLLSFRDA LLLTIVGYIL AGENFPTSGS 540
  541 GGPFSWQEEH FLKEAIVDAV LENPSAGNLK FLNGLTEELE GRLNRLKSEE TKEIPSDDQL 600
  601 DIDALDDDPW GKWGDEEEEE VDNSKADESY DDMQLKLDLR DRVDSLFRFL HKLSSLRTRN 660
  661 LPLREGSLAS ESSFPGEPSG NKGLVYRLIT KVLSKQEIPG LEYHSSTVGR FIKSGFGRFG 720
  721 LGQAKPSLAD QSVILVFVIG GINGIEVLEA QEAVSESGRP DINLVIGGTT LLTPDDMFEL 780
  781 LLGQFSHF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..604] FFAS03 1.18 Neuronal Sec1, NSec1
    2 View Details [605..788] PSI-BLAST 34.69897 Neuronal Sec1, NSec1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.0128431083747296 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle