| Protein: | gi|15227985, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 788 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15227985, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
825.0 | [0..1] | [784..1] |
|
Region A: Residues: [1-604] |
1 11 21 31 41 51
| | | | | |
1 MALIDVAISC LNSIREIEED VKDAIVYIDA GCTESFQFVG AFPLFLELGA RAVCSLENMT 60
61 SLDAVADWNS KSDCAKRIVI MTSRLLNDAH RYMLRCLSTH EGPDAYREYE TLLVQDYNEH 120
121 TKKSDKISKD KGVSKFSSAL ESLTMEPIES ENVDISSGGA QGSVAEASLS RQHEDSLSFG 180
181 LPPISTGSMS DTDDVPPGAT LTAHFLYQLA LKMELKLEIF SLGDQSKNVG KILTDMSSVY 240
241 DVARRKRSAG LLLVDRTLDL ITPCCHGDSL FDRIFSSLPR AERFSSQAQL KQGVPSINRP 300
301 SLDVQVPLGE LLNEEPSKIR DSGLPEGIEA FLRGWDSYTS APQNVGLFNE CDKKSTTNWT 360
361 ELLNGSLVAT ECFRGTPYLE AMIDRKTKDG SVLVKKWLQE ALRRENISVN VRARPGYATK 420
421 PELQAMIKAL SQSQSSLLKN KGIIQLGAAT AAALDESQSA KWDTFSSAEM MLNVSAGDTS 480
481 QGLAAQISDL INKSAVAELQ AKKNEKPDSS SRGLLSFRDA LLLTIVGYIL AGENFPTSGS 540
541 GGPFSWQEEH FLKEAIVDAV LENPSAGNLK FLNGLTEELE GRLNRLKSEE TKEIPSDDQL 600
601 DIDA
|
| Detection Method: |  |
| Confidence: | 1.18 |
| Match: | 1epuA |
| Description: | Neuronal Sec1, NSec1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.0128431083747296 | bayes_pls_golite062009 |
|
Region A: Residues: [605-788] |
1 11 21 31 41 51
| | | | | |
1 LDDDPWGKWG DEEEEEVDNS KADESYDDMQ LKLDLRDRVD SLFRFLHKLS SLRTRNLPLR 60
61 EGSLASESSF PGEPSGNKGL VYRLITKVLS KQEIPGLEYH SSTVGRFIKS GFGRFGLGQA 120
121 KPSLADQSVI LVFVIGGING IEVLEAQEAV SESGRPDINL VIGGTTLLTP DDMFELLLGQ 180
181 FSHF
|
| Detection Method: | |
| Confidence: | 34.69897 |
| Match: | 1dn1A |
| Description: | Neuronal Sec1, NSec1 |
Matching Structure (courtesy of the PDB): |
|
