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Protein Overview: RNC1_ARATH

General Information:
Name(s) found: RNC1_ARATH [Swiss-Prot]
Description(s) found:
Found 15 descriptions.
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  • Ribonuclease III domain-containing protein RNC1, chloroplastic OS=Arabidopsis thaliana GN=RNC1 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 537 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IEA]
    Biological Process: RNA processing [IEA][ISS]
    Molecular Function: RNA binding [IEA][ISS]
    ribonuclease III activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELCSSSPSS SLLRICSSSA PEISFSSSIS QFPSKTQSIL TKSRFQNLRI CASVTAETQG  60
   61 LPRDSPQRLL KELAQRKTAT GPKKKVPPKR FILRPPLDDK KLAERFLNSP QLSLKSFPLL 120
  121 SSCLPSSKLN NADKTWIDEY LLEVKQALGY SLEPSESLGD DNPAKHFDTL LYLAFQHPSC 180
  181 DRARARHVKN GHSRLWFLGQ YVLELALTEF FLQRYPRESP GPMRERVFAL IGKRYLPKWI 240
  241 KAASLQNLIF PYDDMDKLIR KEREPPVKSV FWALFGAIYL CFGMPEVYRV LFEVFGMDPD 300
  301 ADECQPRSRR QLEDVDYVSV EFEGKKLGWQ DIATYKPPED ALFAHPRLFR ACVPPGMHRF 360
  361 RGNIWDFDSK PKVMQTLGYP LTMNDRIKEI TEARNIELGL GLQLCFLHPS KHKFEHPRFC 420
  421 FERLEYVGQK IQDIAMAERL LMKHLDAPGK WLQEKHRRLL MNKFCGRYLR EKRLHNFIIY 480
  481 SEEVHDRYEH NRRLRNPATT AVQQAIHGLA YTIYGKPDVR RLMFEVFDFE QIQPKAV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..131] deduced N/A No confident structure predictions are available.
    2 View Details [132..390] PSI-BLAST 51.69897 RNase III endonuclease catalytic domain; RNase III, C-terminal domain
    3 View Details [391..537] FFAS03 5.83 RNase III endonuclease catalytic domain; RNase III, C-terminal domain


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.46

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle