| Protein: | RNC1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 537 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RNC1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
303.0 | [0..12] | [530..706] |
|
|
298.0 | [0..12] | [530..706] |
|
|
297.0 | [0..68] | [537..58] |
|
|
296.0 | [0..12] | [530..706] |
|
|
296.0 | [0..12] | [530..274] |
|
Region A: Residues: [1-131] |
1 11 21 31 41 51
| | | | | |
1 MELCSSSPSS SLLRICSSSA PEISFSSSIS QFPSKTQSIL TKSRFQNLRI CASVTAETQG 60
61 LPRDSPQRLL KELAQRKTAT GPKKKVPPKR FILRPPLDDK KLAERFLNSP QLSLKSFPLL 120
121 SSCLPSSKLN N
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [132-390] |
1 11 21 31 41 51
| | | | | |
1 ADKTWIDEYL LEVKQALGYS LEPSESLGDD NPAKHFDTLL YLAFQHPSCD RARARHVKNG 60
61 HSRLWFLGQY VLELALTEFF LQRYPRESPG PMRERVFALI GKRYLPKWIK AASLQNLIFP 120
121 YDDMDKLIRK EREPPVKSVF WALFGAIYLC FGMPEVYRVL FEVFGMDPDA DECQPRSRRQ 180
181 LEDVDYVSVE FEGKKLGWQD IATYKPPEDA LFAHPRLFRA CVPPGMHRFR GNIWDFDSKP 240
241 KVMQTLGYPL TMNDRIKEI
|
| Detection Method: | |
| Confidence: | 51.69897 |
| Match: | 1o0wA |
| Description: | RNase III endonuclease catalytic domain; RNase III, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [391-537] |
1 11 21 31 41 51
| | | | | |
1 TEARNIELGL GLQLCFLHPS KHKFEHPRFC FERLEYVGQK IQDIAMAERL LMKHLDAPGK 60
61 WLQEKHRRLL MNKFCGRYLR EKRLHNFIIY SEEVHDRYEH NRRLRNPATT AVQQAIHGLA 120
121 YTIYGKPDVR RLMFEVFDFE QIQPKAV
|
| Detection Method: | |
| Confidence: | 5.83 |
| Match: | 1o0wA |
| Description: | RNase III endonuclease catalytic domain; RNase III, C-terminal domain |
| Matching Structure (courtesy of the PDB): |
|
