| Protein: | RNC1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 537 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RNC1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
303.0 | [0..12] | [530..706] |
|
|
298.0 | [0..12] | [530..706] |
|
|
297.0 | [0..68] | [537..58] |
|
|
296.0 | [0..12] | [530..706] |
|
|
296.0 | [0..12] | [530..274] |
|
Region A: Residues: [1-131] |
1 11 21 31 41 51
| | | | | |
1 MELCSSSPSS SLLRICSSSA PEISFSSSIS QFPSKTQSIL TKSRFQNLRI CASVTAETQG 60
61 LPRDSPQRLL KELAQRKTAT GPKKKVPPKR FILRPPLDDK KLAERFLNSP QLSLKSFPLL 120
121 SSCLPSSKLN N
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.315 | b.6.1 | Cupredoxins |
| View | Download | 0.296 | a.48.1 | N-terminal domain of cbl (N-cbl) |
| View | Download | 0.295 | f.39.1 | Description not found. |
| View | Download | 0.278 | a.29.16 | Description not found. |
| View | Download | 0.275 | a.48.1 | N-terminal domain of cbl (N-cbl) |
| View | Download | 0.271 | d.218.1 | Nucleotidyltransferase |
|
Region A: Residues: [132-390] |
1 11 21 31 41 51
| | | | | |
1 ADKTWIDEYL LEVKQALGYS LEPSESLGDD NPAKHFDTLL YLAFQHPSCD RARARHVKNG 60
61 HSRLWFLGQY VLELALTEFF LQRYPRESPG PMRERVFALI GKRYLPKWIK AASLQNLIFP 120
121 YDDMDKLIRK EREPPVKSVF WALFGAIYLC FGMPEVYRVL FEVFGMDPDA DECQPRSRRQ 180
181 LEDVDYVSVE FEGKKLGWQD IATYKPPEDA LFAHPRLFRA CVPPGMHRFR GNIWDFDSKP 240
241 KVMQTLGYPL TMNDRIKEI
|
| Detection Method: | |
| Confidence: | 51.69897 |
| Match: | 1o0wA |
| Description: | RNase III endonuclease catalytic domain; RNase III, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [391-537] |
1 11 21 31 41 51
| | | | | |
1 TEARNIELGL GLQLCFLHPS KHKFEHPRFC FERLEYVGQK IQDIAMAERL LMKHLDAPGK 60
61 WLQEKHRRLL MNKFCGRYLR EKRLHNFIIY SEEVHDRYEH NRRLRNPATT AVQQAIHGLA 120
121 YTIYGKPDVR RLMFEVFDFE QIQPKAV
|
| Detection Method: | |
| Confidence: | 5.83 |
| Match: | 1o0wA |
| Description: | RNase III endonuclease catalytic domain; RNase III, C-terminal domain |
| Matching Structure (courtesy of the PDB): |
|
