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Protein Overview: gi|18416828, gi|...

General Information:
Name(s) found: gi|18416828 [NCBI NR]
gi|14586358 [NCBI NR]
Description(s) found:
Found 10 descriptions.
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  • gi|18416828|ref|NP_568261.1| RNA binding [Arabidopsis thaliana] [NCBI NR]
  • gi|14586358|emb|CAC42889.1| putative protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 419 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: protein modification process [IEA]
    RNA processing [IEA]
    Molecular Function: RNA binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVGTLSPDTP DTQFISLCYK LQIVEVVRSP LFSTSRPGGS RGRAMRSRLR LHKPIILGQM  60
   61 KFGESDFDVS YDLIFMLEKD NSNEAPAEPP REMRIHMDKI ARVVARKGLR IERKIMNVSE 120
  121 YLAKNQDEGA QEPEAPATLK GDAQHYRRPF LLSDPAPKFP DYVLPEGYTI EDVDTIFLTA 180
  181 QIVGRYGEEF WLDLIKEVDN KPQFEFLKPA DSKFDYFNRL SVVASEGLKR SEKLTSSRMA 240
  241 IVSKAFFYHL RRQNEKRELT HKEGAAKACT LFGALYAFVG PDGCFADIKD EDLPLLQHPS 300
  301 AIKNILTKLQ PRMPPLGGES EEPEFDESVL VPEDQFLAQH PGSSTIMVSV PDPDDWKVVK 360
  361 ITVQSLSENV ASLKEKISGE IQFPTNKQKL RGKAGFLKDN TSLAHYNVGA GEILTLSWW

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..81] deduced N/A No confident structure predictions are available.
    2 View Details [82..160] PSI-BLAST 14.221849 Solution structure of SURP domain in BAB30904
    3 View Details [161..230] PSI-BLAST 26.154902 No description for 2dt7B was found.
    4 View Details [231..309] MSA 1.079994 View MSA. Confident ab initio structure predictions are available.
    5 View Details [310..419] PSI-BLAST 11.69897 Solution structure of Ubiquitin-like domain in splicing factor AAL91182


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle