| Protein: | gi|18416828, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 419 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18416828, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
274.0 | [0..85] | [358..6] |
|
|
273.0 | [0..77] | [348..14] |
|
|
268.0 | [0..77] | [365..30] |
|
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262.0 | [0..77] | [365..30] |
|
|
262.0 | [0..85] | [365..41] |
|
Region A: Residues: [1-81] |
1 11 21 31 41 51
| | | | | |
1 MVGTLSPDTP DTQFISLCYK LQIVEVVRSP LFSTSRPGGS RGRAMRSRLR LHKPIILGQM 60
61 KFGESDFDVS YDLIFMLEKD N
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [82-160] |
1 11 21 31 41 51
| | | | | |
1 SNEAPAEPPR EMRIHMDKIA RVVARKGLRI ERKIMNVSEY LAKNQDEGAQ EPEAPATLKG 60
61 DAQHYRRPFL LSDPAPKFP
|
| Detection Method: | |
| Confidence: | 14.221849 |
| Match: | 1ug0A |
| Description: | Solution structure of SURP domain in BAB30904 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [161-230] |
1 11 21 31 41 51
| | | | | |
1 DYVLPEGYTI EDVDTIFLTA QIVGRYGEEF WLDLIKEVDN KPQFEFLKPA DSKFDYFNRL 60
61 SVVASEGLKR
|
| Detection Method: | |
| Confidence: | 26.154902 |
| Match: | 2dt7B |
| Description: | No description for 2dt7B was found. |
|
Region A: Residues: [231-309] |
1 11 21 31 41 51
| | | | | |
1 SEKLTSSRMA IVSKAFFYHL RRQNEKRELT HKEGAAKACT LFGALYAFVG PDGCFADIKD 60
61 EDLPLLQHPS AIKNILTKL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.869 | N/A | N/A | a.60.8 | HRDC-like |
|
Region A: Residues: [310-419] |
1 11 21 31 41 51
| | | | | |
1 QPRMPPLGGE SEEPEFDESV LVPEDQFLAQ HPGSSTIMVS VPDPDDWKVV KITVQSLSEN 60
61 VASLKEKISG EIQFPTNKQK LRGKAGFLKD NTSLAHYNVG AGEILTLSWW
|
| Detection Method: | |
| Confidence: | 11.69897 |
| Match: | 1we6A |
| Description: | Solution structure of Ubiquitin-like domain in splicing factor AAL91182 |
Matching Structure (courtesy of the PDB): |
|
