| Protein: | gi|18416828, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 419 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18416828, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
274.0 | [0..85] | [358..6] |
|
|
273.0 | [0..77] | [348..14] |
|
|
268.0 | [0..77] | [365..30] |
|
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262.0 | [0..77] | [365..30] |
|
|
262.0 | [0..85] | [365..41] |
|
Region A: Residues: [1-81] |
1 11 21 31 41 51
| | | | | |
1 MVGTLSPDTP DTQFISLCYK LQIVEVVRSP LFSTSRPGGS RGRAMRSRLR LHKPIILGQM 60
61 KFGESDFDVS YDLIFMLEKD N
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.741 | d.68.6 | DNA-binding protein Sso10b (AlbA) |
| View | Download | 0.638 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.615 | a.39.1 | EF-hand |
| View | Download | 0.509 | a.3.1 | Cytochrome c |
| View | Download | 0.497 | a.7.3 | Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |
| View | Download | 0.497 | a.7.3 | Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |
| View | Download | 0.491 | a.12.1 | Kix domain of CBP (creb binding protein) |
| View | Download | 0.483 | a.8.9 | Description not found. |
| View | Download | 0.463 | d.79.3 | L30e-like |
| View | Download | 0.424 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.403 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.341 | d.58.48 | MTH1187-like |
| View | Download | 0.281 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.257 | a.4.5 | "Winged helix" DNA-binding domain |
|
Region A: Residues: [82-160] |
1 11 21 31 41 51
| | | | | |
1 SNEAPAEPPR EMRIHMDKIA RVVARKGLRI ERKIMNVSEY LAKNQDEGAQ EPEAPATLKG 60
61 DAQHYRRPFL LSDPAPKFP
|
| Detection Method: | |
| Confidence: | 14.221849 |
| Match: | 1ug0A |
| Description: | Solution structure of SURP domain in BAB30904 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [161-230] |
1 11 21 31 41 51
| | | | | |
1 DYVLPEGYTI EDVDTIFLTA QIVGRYGEEF WLDLIKEVDN KPQFEFLKPA DSKFDYFNRL 60
61 SVVASEGLKR
|
| Detection Method: | |
| Confidence: | 26.154902 |
| Match: | 2dt7B |
| Description: | No description for 2dt7B was found. |
|
Region A: Residues: [231-309] |
1 11 21 31 41 51
| | | | | |
1 SEKLTSSRMA IVSKAFFYHL RRQNEKRELT HKEGAAKACT LFGALYAFVG PDGCFADIKD 60
61 EDLPLLQHPS AIKNILTKL
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.869 | N/A | N/A | a.60.8 | HRDC-like |
| View | Download | 0.791 | N/A | N/A | a.60.8 | HRDC-like |
| View | Download | 0.722 | N/A | N/A | a.60.8 | HRDC-like |
| View | Download | 0.689 | N/A | N/A | a.60.8 | HRDC-like |
| View | Download | 0.689 | N/A | N/A | a.77.1 | DEATH domain |
| View | Download | 0.622 | N/A | N/A | a.112.1 | Description not found. |
| View | Download | 0.608 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.555 | N/A | N/A | a.112.1 | Description not found. |
| View | Download | 0.510 | N/A | N/A | a.64.1 | Saposin |
| View | Download | 0.508 | N/A | N/A | a.28.1 | ACP-like |
|
Region A: Residues: [310-419] |
1 11 21 31 41 51
| | | | | |
1 QPRMPPLGGE SEEPEFDESV LVPEDQFLAQ HPGSSTIMVS VPDPDDWKVV KITVQSLSEN 60
61 VASLKEKISG EIQFPTNKQK LRGKAGFLKD NTSLAHYNVG AGEILTLSWW
|
| Detection Method: | |
| Confidence: | 11.69897 |
| Match: | 1we6A |
| Description: | Solution structure of Ubiquitin-like domain in splicing factor AAL91182 |
Matching Structure (courtesy of the PDB): |
|
