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Protein Overview: gi|15240144, gi|...

General Information:
Name(s) found: gi|9759304 [NCBI NR]
gi|20258877 [NCBI NR]
gi|15293005 [NCBI NR]
gi|15240144 [NCBI NR]
Description(s) found:
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  • gi|9759304|dbj|BAB09810.1| late embryogenesis abundant protein LEA like [Arabidopsis thaliana] [NCBI NR]
  • gi|20258877|gb|AAM14110.1| putative late embryogenesis abundant protein LEA [Arabidopsis thaliana] [NCBI NR]
  • gi|15293005|gb|AAK93613.1| putative late embryogenesis abundant protein LEA [Arabidopsis thaliana] [NCBI NR]
  • gi|15240144|ref|NP_196294.1| late embryogenesis abundant group 1 domain-containing protein / LEA group 1 domain-containing protein [Arabidopsis thaliana] [NCBI NR]
  • (Q9FG31) Late embryogenesis abundant protein LEA like [athaliana3702.FASTAC.txt]
  • putative late embryogenesis abundant protein LEA [Arabidopsis thaliana]gi|15293005|gb|AAK93613.1| putative late embryogenesis abundant protein LEA [Arabidopsis thaliana]gi|9759304|dbj|BAB09810.1| late embryogenesis abundant protein LEA like [Arabidopsis [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Late embryogenesis abundant group 1 domain-containing protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | late embryogenesis abundant group 1 domain-containing protein / LEA group 1 domain-containing protein | chr5:2089755-2090314 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative late embryogenesis abundant protein LEA [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • late embryogenesis abundant protein LEA like [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: LEA4-5 | Late Embryogenesis Abundant 4-5 | chr5:2089754-2090313 REVERSE LENGTH=158 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Late embryogenesis abundant protein 4-5 OS=Arabidopsis thaliana GN=LEA4-5 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 158 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: embryonic development [IEA]
    embryonic development ending in seed dormancy [ISS]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQSMKETASN IAASAKSGMD KTKATLEEKA EKMKTRDPVQ KQMATQVKED KINQAEMQKR  60
   61 ETRQHNAAMK EAAGAGTGLG LGTATHSTTG QVGHGTGTHQ MSALPGHGTG QLTDRVVEGT 120
  121 AVTDPIGRNT GTGRTTAHNT HVGGGGATGY GTGGGYTG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..90] FFAS03 1.02 Tropomyosin
    2 View Details [91..158] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle