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Protein Overview: gi|11285545, gi|...

General Information:
Name(s) found: gi|6562319 [NCBI NR]
gi|15241507 [NCBI NR]
gi|11285545 [NCBI NR]
Description(s) found:
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  • gi|6562319|emb|CAB62617.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15241507|ref|NP_196422.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • pir||T45630 hypothetical protein F13G24.250 - Arabidopsis thaliana [NCBI NR]
  • (Q9SD79) Hypothetical protein [athaliana3702.FASTAC.txt]
  • putative protein [Arabidopsis thaliana]gi|11285545|pir||T45630 hypothetical protein F13G24.250 - Arabidopsis thalianagi|15241507|ref|NP_196422.1| expressed protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Expressed protein, predicted protein, Arabidopsis thaliana [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | similar to unnamed protein product [Vitis vinifera] (GB:CAO62462.1); similar to unknown [Populus trichocarpa] (GB:ABK95457.1); contains InterPro domain Protein of unknown function DUF1118 (InterPro:IPR009500); contains InterPro domain Unchar [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | similar to unnamed protein product [Vitis vinifera] (GB:CAO62462.1); similar to unknown [Populus trichocarpa] (GB:ABK95457.1); contains InterPro domain Protein of unknown function DUF1118 (InterPro:IPR009500); contains InterPro domain Uncharacterised conserved protein UCP022207 (InterPro:IPR016801) | chr5:2578419-2578965 FORWARD [TAIR_A_Thaliana_na_04-12-2008_reversed.fasta]
  • | Symbols: | Protein of unknown function (DUF1118) | chr5:2578418-2578964 FORWARD LENGTH=158 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Putative uncharacterized protein F13G24.250 OS=Arabidopsis thaliana GN=F13G24.250 PE=4 SV=1 [ARATH-contam.fasta]
  • Putative uncharacterized protein F13G24.250 OS=Arabidopsis thaliana GN=F13G24.250 PE=1 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 158 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    chloroplast thylakoid membrane [IDA]
    thylakoid [IDA]
    Biological Process: NONE FOUND
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAKLICSSL TVHSMANKKP SPSAATRTIT SKKSTATPQV KLLTRVEQLK LLTKAEKAGL  60
   61 LSLAEKSGFS LSTIERLGLL TKAEEFGVLS AATNPETPGT LFTLSLGLLL LGPVFAYVVP 120
  121 EDYTWEVVIQ VLVALLSVLG GSAAFAASGF VSNLQKSD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..158] Pfam 104.69897 No description for PF06549.3 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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