YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|11285545, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.86
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAKLICSSL TVHSMANKKP SPSAATRTIT SKKSTATPQV KLLTRVEQLK LLTKAEKAGL  60
   61 LSLAEKSGFS LSTIERLGLL TKAEEFGVLS AATNPETPGT LFTLSLGLLL LGPVFAYVVP 120
  121 EDYTWEVVIQ VLVALLSVLG GSAAFAASGF VSNLQKSD

Type	Start	End	Confidence
Cytoplasmic	1	98	0.80
Transmembrane Helix	99	119	0.93
Non-Cytoplasmic	120	126	0.74
Transmembrane Helix	127	151	0.87
Cytoplasmic	152	158	0.70