YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: HDA17_ARATH

General Information:
Name(s) found: HDA17_ARATH [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
SHOW ALL
  • Histone deacetylase 17 OS=Arabidopsis thaliana GN=HDA17 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 158 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    Biological Process: histone deacetylation [IEA]
    Molecular Function: histone deacetylase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFSMLFTGH AECVKFVKKF NLPLLVTGGG GYTKENVARC WTVETGILLD TELPNEISEN  60
   61 DYIKYFAPDF SLKIPGGHIE NLNTKSYISS IKVQILENLR YIQHAPSVQM QEVPPDFYIP 120
  121 DFDEDEQNPD VRVDQRSRDK QIQRDDEYFD GDNDNDAS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..158] PSI-BLAST 34.522879 Crystal Structure of human HDAC8 complexed with Trichostatin A


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle