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Protein Overview: gi|15233564, gi|...

General Information:
Name(s) found: gi|7269836 [NCBI NR]
gi|15233564 [NCBI NR]
Description(s) found:
Found 11 descriptions.
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  • gi|7269836|emb|CAB79696.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15233564|ref|NP_194667.1| protein kinase family protein / WD-40 repeat family protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 1494 amino acids

    Gene Ontology:
    Cellular Component: CUL4 RING ubiquitin ligase complex [ISS]
    Biological Process: protein amino acid phosphorylation [IEA][ISS]
    Molecular Function: ATP binding [IEA][ISS]
    protein kinase activity [IEA][ISS]
    protein serine/threonine kinase activity [IEA]
    binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNKIARTTQ VSATEYYLHD LPSSYNLVLK EVLGRGRFLK SIQCKHDEGL VVVKVYFKRG  60
   61 DSIDLREYER RLVKIKDVFL SLEHPHVWPF QFWQETDKAA YLVRQYFYSN LHDRLSTRPF 120
  121 LSLVEKKWLA FQLLLAVKQC HEKDICHGDI KCENVLLTSW NWLYLADFAS FKPTYIPYDD 180
  181 PSDFSFFFDT RGQRLCYLAP ERFYEHGGET QVAQDAPLKP SMDIFAVGCV IAELFLEGQP 240
  241 LFELAQLLAY RRGQHDPSQH LEKIPDPGIR KMILHMIQLE PEARLSAEDY LQNYVGVVFP 300
  301 NYFSPFLHTL YCCWNPLPSD MRVATCQGIF QEILKKMMEN KSGDEIGVDS PVTSNPMNAS 360
  361 TVQETFANHK LNSSKDLIRN TVNSKDEIFY SISDALKKNR HPFLKKITMD DLGTLMSLYD 420
  421 SRSDTYGTPF LPVEGNMRCE GMVLIASMLC SCIRNIKLPH LRREAILLLR SCSLYIDDDD 480
  481 RLQRVLPYVV ALLSDPTAIV RCAAMETLCD ILPLVRDFPP SDAKIFPEYI FPMLSMLPED 540
  541 TEESVRICYA SNIAKLALTA YGFLIHSFQL SDVGVLNELN SQQISTTPAS ETPSHLQKAN 600
  601 GNAQLQQLRK TIAEVVQELV MGPKQTPNVR RALLQDIGEL CFFFGQRQSN DFLLPILPAF 660
  661 LNDRDEQLRS VFFEKIVYVC FFVGQRSVEE YLLPYIDQAL SDQTEAVIVN ALECLSTLCK 720
  721 SSFLRKRALL QMIECVYPLL CYPSQWVRRA VVTFIAASSE CLGAVDSYAF IAPVIRSYLS 780
  781 RLPASIASEE GLLSCLKPPV TREVVYRIFE KTRNPEFMAK QRKMWYSSSP QSKDWESVDL 840
  841 FDKDAGELNS VECRAEQKQS VEGKKQIKSA SKQPEVQGKY AEKDAKLRIP RNPRPNASNT 900
  901 VELRDPVYPE KLQFSGFMAP YVSGANSFIE PENIPLYSFS MDKRAATNPP VASESSLQMN 960
  961 SLGMGSLSVP WMDSMSKSFN LASSVPVPKL ISGSFHVGTN PKQFYRVVHE PESRENDQIS1020
 1021 SAISKFQDLG VSSSSKSASV TSEDASSPAD LVGEPSLSRT SVPDSGWKPR GVLVAHLQEH1080
 1081 RSAVNDIATS SDHSFFVSAS DDSTVKVWDS RKLEKDISFR SRLTYHLEGS RGMCTTMLRN1140
 1141 STQVVVGASD GVIHMFSIDH ISRGLGNVVE KYSGIVDIKK KDVKEGALVS LLNYTADSLS1200
 1201 GPMVMYSTQN CGIHLWDTRS DLDAWTLKAN PEEGYVSSLV TSPCGNWFVS GSSRGVLTLW1260
 1261 DLRFRVPVNS WQYPIICPIE KMCLCFLPPS VSVSTTMKPL IYVAAGCNEV SLWNAEGGSC1320
 1321 HQVLRVANYE NETDVSEFQW KLPSNKVNPK PNHRQNMSSK YRIEELNEPP PRLPGIRSLL1380
 1381 PLPGGDLLTG GTDLKIRRWD YSSPERSYCI CGPSLKGVGN DDFYELKTNT GVQFVQETKR1440
 1441 RPLATKLTAK AVLAAAATDT AGCHRDSVQS LASVKLNQRL LISSSRDGAI KVWK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..385] PSI-BLAST 87.0 No description for 2jdoA was found.
    2 View Details [386..916] PSI-BLAST 97.0 Constant regulatory domain of protein phosphatase 2a, pr65alpha
    3 View Details [917..1009] deduced N/A No confident structure predictions are available.
    4 View Details [1010..1361] PSI-BLAST 76.30103 No description for 2gnqA was found.
    5 View Details [1362..1494] PSI-BLAST 52.0 F-box/WD-repeat protein 1 (beta-TRCP1)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.686492203566958 bayes_pls_golite062009
  • transferase activity
    		•  0.66841261245817 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.66326000691279 bayes_pls_golite062009
  • kinase activity
    		•  0.65753777854807 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  0.64444215862273 bayes_pls_golite062009
  • protein kinase activity
    		•  0.56587465829201 bayes_pls_golite062009
  • binding
    		•  0.0554152720226 bayes_pls_golite062009
    2
    Term Confidence Notes
  • binding
    		•  0.373576425899935 bayes_pls_golite062009
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle