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Protein Overview: IPT2_ARATH

General Information:
Name(s) found: IPT2_ARATH [Swiss-Prot]
Description(s) found:
Found 16 descriptions.
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  • tRNA dimethylallyltransferase 2 OS=Arabidopsis thaliana GN=IPT2 PE=1 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 466 amino acids

    Gene Ontology:
    Cellular Component: cytosol [IDA]
    Biological Process: cytokinin biosynthetic process [IDA][IGI]
    Molecular Function: tRNA isopentenyltransferase activity [IGI]
    adenylate dimethylallyltransferase activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMMLNPSNGG IEGEKMKKKA KVVVIMGPTG SGKSKLAVDL ASHFPVEIIN ADAMQIYSGL  60
   61 DVLTNKVTVD EQKGVPHHLL GTVSSDMEFT ARDFRDFTVP LIEEIVSRNH IPVLVGGTHY 120
  121 YIQAVVSKFL LDDAAEDTEE CCADVASVVD QDMVVESVFG RDDLSHGYEL LKELDPVAAN 180
  181 RIHPNNHRKI NQYLSLHASR GVLPSKLYQG KTAENWGCIN ASRFDYCLIC MDAETAVLDR 240
  241 YVEQRVDAMV DAGLLDEVYD IYKPGADYTR GLRQSIGVRE FEDFLKIHLS ETCAGHLTSL 300
  301 SNDDKVMKEN LRKILNFPKD DKLRIMLEEA IDRVKLNTRR LLRRQKRRVS RLETVFGWNI 360
  361 HYIDATEYIL SKSEESWNAQ VVKPASEIIR CFLETETESG RDPTSGKSIE RDLWTQYVCE 420
  421 ACGNKILRGR HEWEHHKQGR THRKRTTRHK NSQTYKNREV QEAEVN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..344] PSI-BLAST 89.0 No description for 2qgnA was found.
    2 View Details [345..466] FFAS03 2.26 Solution Structure of a Human C2H2-type Zinc Finger Protein

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • nucleic acid binding
    		•  1.87304745656124 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.85323409755281 bayes_pls_golite062009
  • DNA binding
    		•  1.84724008745009 bayes_pls_golite062009
  • binding
    		•  1.50322082649745 bayes_pls_golite062009
  • transcription factor activity
    		•  0.990009713440662 bayes_pls_golite062009
  • protein binding
    		•  0.447267628146963 bayes_pls_golite062009
  • catalytic activity
    		•  0.263007611601737 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
    		•  0.17353923040638 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle