| Protein: | IPT2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 466 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IPT2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
374.0 | [0..4] | [464..1] |
|
Region A: Residues: [1-344] |
1 11 21 31 41 51
| | | | | |
1 MMMLNPSNGG IEGEKMKKKA KVVVIMGPTG SGKSKLAVDL ASHFPVEIIN ADAMQIYSGL 60
61 DVLTNKVTVD EQKGVPHHLL GTVSSDMEFT ARDFRDFTVP LIEEIVSRNH IPVLVGGTHY 120
121 YIQAVVSKFL LDDAAEDTEE CCADVASVVD QDMVVESVFG RDDLSHGYEL LKELDPVAAN 180
181 RIHPNNHRKI NQYLSLHASR GVLPSKLYQG KTAENWGCIN ASRFDYCLIC MDAETAVLDR 240
241 YVEQRVDAMV DAGLLDEVYD IYKPGADYTR GLRQSIGVRE FEDFLKIHLS ETCAGHLTSL 300
301 SNDDKVMKEN LRKILNFPKD DKLRIMLEEA IDRVKLNTRR LLRR
|
| Detection Method: |  |
| Confidence: | 89.0 |
| Match: | 2qgnA |
| Description: | No description for 2qgnA was found. |
|
Region A: Residues: [345-466] |
1 11 21 31 41 51
| | | | | |
1 QKRRVSRLET VFGWNIHYID ATEYILSKSE ESWNAQVVKP ASEIIRCFLE TETESGRDPT 60
61 SGKSIERDLW TQYVCEACGN KILRGRHEWE HHKQGRTHRK RTTRHKNSQT YKNREVQEAE 120
121 VN
|
| Detection Method: | |
| Confidence: | 2.26 |
| Match: | 1zr9A |
| Description: | Solution Structure of a Human C2H2-type Zinc Finger Protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| nucleic acid binding | 1.87304745656124 | bayes_pls_golite062009 |
| transcription regulator activity | 1.85323409755281 | bayes_pls_golite062009 |
| DNA binding | 1.84724008745009 | bayes_pls_golite062009 |
| binding | 1.50322082649745 | bayes_pls_golite062009 |
| transcription factor activity | 0.990009713440662 | bayes_pls_golite062009 |
| protein binding | 0.447267628146963 | bayes_pls_golite062009 |
| catalytic activity | 0.263007611601737 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 0.17353923040638 | bayes_pls_golite062009 |
