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Protein Overview: gi|15238069, gi|...

General Information:
Name(s) found: gi|7960735 [NCBI NR]
gi|27808536 [NCBI NR]
gi|15238069 [NCBI NR]
gi|11279583 [NCBI NR]
gi|110743616 [NCBI NR]
Description(s) found:
Found 15 descriptions.
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  • gi|7960735|emb|CAB92057.1| (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|27808536|gb|AAO24548.1| At5g10160 [Arabidopsis thaliana] [NCBI NR]
  • gi|15238069|ref|NP_196578.1| beta-hydroxyacyl-ACP dehydratase, putative [Arabidopsis thaliana] [NCBI NR]
  • pir||T50020 (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase-like protein - Arabidopsis thaliana [NCBI NR]
  • gi|110743616|dbj|BAE99645.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 219 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    cell wall [IDA]
    membrane [IDA]
    Biological Process: fatty acid biosynthetic process [IEA][ISS]
    Molecular Function: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity [ISS]
    hydro-lyase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASSSVFTV SPSRNLAAIP LHQSLSPPLL RSSSVAFRPK RRSSSLVLCS TDESKSTAEK  60
   61 EIPIELRYEA FPTVMDINKI QEILPHRFPF LLVDRVIEYT AGVSAVAIKN VTINDNFFPG 120
  121 HFPERPIMPG VLMVEAMAQV GGIVMLQPEV GGSRSNFFFA GIDKVRFRKP VIAGDTLVMR 180
  181 MTLVKLQKRF GIAKMEGKAY VGNSVVCEGE FLMAMGKEE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..219] PSI-BLAST 48.221849 The Structure of (3R)-hydroxyacyl-ACP dehydratase (FabZ)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • CoA hydrolase activity
    		•  1.75530090056705 bayes_pls_golite062009
  • catalytic activity
    		•  1.11649534052993 bayes_pls_golite062009
  • thiolester hydrolase activity
    		•  0.65794221902015 bayes_pls_golite062009
  • 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity
    		•  0.57527342054578 bayes_pls_golite062009
  • 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity
    		•  0.57527342054578 bayes_pls_golite062009
  • acyl-CoA thioesterase activity
    		•  0.24094527143225 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.47

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle