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Protein Overview: RGXT3_ARATH

General Information:
Name(s) found: RGXT3_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|9954757|gb|AAG09108.1|AC009323_19 Hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • gi|28827600|gb|AAO50644.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|26449884|dbj|BAC42064.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • pir||B96607 hypothetical protein F25P12.100 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15223560|ref|NP_176048.1| UDP-xylosyltransferase [Arabidopsis thaliana] [NCBI NR]
  • UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase 3 OS=Arabidopsis thaliana GN=RGXT3 PE=1 SV=1 [Swiss-Prot]
  • (Q9FXA7) F25P12.100 protein (Hypothetical protein) [athaliana3702.FASTAC.txt]
  • unknown protein [Arabidopsis thaliana]gi|28827600|gb|AAO50644.1| unknown protein [Arabidopsis thaliana]gi|25354714|pir||B96607 hypothetical protein F25P12.100 [imported] - Arabidopsis thalianagi|15223560|ref|NP_176048.1| expressed protein [Arabidopsis [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Expressed protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G01220.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39698.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN69309.1); contains InterPro domain Reticulon; [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Hypothetical protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G01220.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39698.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN69309.1); contains InterPro domain Reticulon; (InterPro:IPR003388) | chr1:21189501-21191735 REVERSE [TAIR_A_Thaliana_na_04-12-2008_reversed.fasta]
  • | Symbols: RXGT1 | RhamnoGalacturonan specific Xylosyltransferase 1 | chr1:21185836-21188070 REVERSE LENGTH=383 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • F25P12.100 protein OS=Arabidopsis thaliana GN=F25P12.100 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 383 amino acids

    Gene Ontology:
    Cellular Component: endoplasmic reticulum [IEA]
    Biological Process: biological_process [ND]
    Molecular Function: UDP-xylosyltransferase activity [IEP]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQQSQRPIS NRHISLLNRN GLILLLLLAL FVILGVFLPL TKSSLFMFPN TTSSSLSPSS  60
   61 SLSVSDWRDY SLAQAVKFVA KNETVIVCAV SYPFLPFLNN WLISISRQKH QEKVLVIAED 120
  121 YATLYKVNEK WPGHAVLIPP ALDPQSAHKF GSQGFFNLTS RRPQHLLNIL ELGYNVMYND 180
  181 VDMVWLQDPF DYLQGSYDAY FMDDMIAIKP LNHSHDLPPL SRSGVTYVCS CMIFLRSTDG 240
  241 GKLLMKTWVE EIQAQPWNNT QAKKPHDQPA FNRALHKTAN QVKVYLLPQS AFPSGGLYFR 300
  301 NETWVNETRG KHVIVHNNYI IGYDKKMKRF QDFSLWLVDD HALESPLGKL EIYQEQNTTT 360
  361 EGKNLTKIVR KQRKNRGKKH KLP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..383] FFAS03 1.15 apo form of the 162S mutant of glycogenin

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.2097350467072 bayes_pls_golite062009
  • transferase activity
    		•  0.75347715535193 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle