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Protein Overview: CBF5_ARATH

General Information:
Name(s) found: CBF5_ARATH [Swiss-Prot]
Description(s) found:
Found 20 descriptions.
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  • H/ACA ribonucleoprotein complex subunit 4 OS=Arabidopsis thaliana GN=CBF5 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 565 amino acids

    Gene Ontology:
    Cellular Component: cytosol [IDA]
    nucleolus [IDA]
    Biological Process: pseudouridine synthesis [IEA]
    Molecular Function: pseudouridine synthase activity [ISS][TAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEVDISHSK KKKQDKTEND AADTGDYMIK PQSFTPAIDT SQWPILLKNY DRLNVRTGHY  60
   61 TPISAGHSPL KRPLQEYIRY GVINLDKPAN PSSHEVVAWI KRILRVEKTG HSGTLDPKVT 120
  121 GNLIVCIDRA TRLVKSQQGA GKEYVCVARL HSAVPDVAKV ARALESLTGA VFQRPPLISA 180
  181 VKRQLRIRTI YESKLLEYDA DRHLVVFWVS CEAGTYIRTM CVHLGLLLGV GGHMQELRRV 240
  241 RSGILGENNN MVTMHDVMDA QFVYDNSRDE SYLRRVIMPL EMILTSYKRL VVKDSAVNAI 300
  301 CYGAKLMIPG LLRFENDIDV GTEVVLMTTK GEAIAVGIAE MTTSVMATCD HGVVAKIKRV 360
  361 VMDRDTYPRK WGLGPRASMK KKLIADGKLD KHGKPNEKTP VEWSRNVVLP TGGDAIIAGA 420
  421 AAAPEEIKAD AENGEAGEAR KRKHDDSSDS PAPVTTKKSK TKEVEGEEAE EKVKSSKKKK 480
  481 KKDKEEEKEE EAGSEKKEKK KKKDKKEEVI EEVASPKSEK KKKKKSKDTE AAVDAEDESA 540
  541 AEKSEKKKKK KDKKKKNKDS EDDEE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..361] PSI-BLAST 91.69897 No description for 2ausC was found.
    2 View Details [362..565] PSI-BLAST 5.0 Heavy meromyosin subfragment


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle