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Protein Overview: PYM_ARATH

General Information:
Name(s) found: PYM_ARATH [Swiss-Prot]
Description(s) found:
Found 15 descriptions.
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  • Protein POLYCHOME OS=Arabidopsis thaliana GN=PYM PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 259 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: DNA endoreduplication [IMP]
    trichome branching [IMP]
    response to UV-B [IMP]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPEARDRIER QVDYPAAFLN RRSHGILLDE PATQHNLFGS PVQRVPSEAT GGLGSIGQGS  60
   61 MTGRGGLVRG NFGIRRTGGG RRGQIQFRSP QGRENMSLGV TRRGRARASN SVLPSWYPRT 120
  121 PLRDISAVVR AIERRRARMG EGVGRDIETP TPQQLGVLDS LVPLSGAHLE HDYSMVTPGP 180
  181 SIGFKRPWPP STAKVHQILL DITRENTGEE DALTPEKKLL NSIDKVEKVV MEEIQKMKST 240
  241 PSAKRAEREK RVRTLMSMR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..170] deduced N/A No confident structure predictions are available.
    2 View Details [171..259] MSA 1.006989 View MSA. Confident ab initio structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle