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Protein Overview: SDIR1_ARATH

General Information:
Name(s) found: SDIR1_ARATH [Swiss-Prot]
Description(s) found:
Found 15 descriptions.
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  • E3 ubiquitin-protein ligase SDIR1 OS=Arabidopsis thaliana GN=SDIR1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 273 amino acids

    Gene Ontology:
    Cellular Component: intracellular membrane-bounded organelle [IDA]
    microsome [IDA]
    Biological Process: response to abscisic acid stimulus [IEP]
    response to salt stress [IEP]
    positive regulation of abscisic acid mediated signaling pathway [IMP]
    response to water deprivation [IEP]
    Molecular Function: ubiquitin-protein ligase activity [IDA]
    zinc ion binding [ISS]
    protein binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFVFRGSRG DLESGFSGGF LPERRAMRVH GARPVNSNSL AFLVTVLLLF MILNSHQMPP  60
   61 NFLLWLVLGV FLMATTLRMY ATCQQLQAHA QAQAAAASGL FSHTELRLHV PPSIALATRG 120
  121 RLQGLRLQLA LLDREFDDLD YETLRALDSD NVSTTSMSEE EINALPVHKY KVLDPENGCS 180
  181 LAKQASTSSS AEKMLDSANE SKKGTEDELT CSVCLEQVTV GEIVRTLPCL HQFHAGCIDP 240
  241 WLRQQGTCPV CKFRAHSGWQ EQDEIDDDAS DMV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..151] deduced N/A No confident structure predictions are available.
    2 View Details [152..273] PSI-BLAST 4.221849 Np95-like ring finger protein isoform b [Homo sapiens]


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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