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Protein Overview: PP153_ARATH

General Information:
Name(s) found: PP153_ARATH [Swiss-Prot]
Description(s) found:
Found 14 descriptions.
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  • Pentatricopeptide repeat-containing protein At2g15690 OS=Arabidopsis thaliana GN=PCMP-H66 PE=2 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 579 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSLMAIRCA RTQNIVTIGS LLQLRSSFPR LSSQFHFSGT LNSIPIKHLS TSAAANDYHQ  60
   61 NPQSGSPSQH QRPYPPQSFD SQNQTNTNQR VPQSPNQWST QHGGQIPQYG GQNPQHGGQR 120
  121 PPYGGQNPQQ GGQMSQYGGH NPQHGGHRPQ YGGQRPQYGG PGNNYQNQNV QQSNQSQYYT 180
  181 PQQQQQPQPP RSSNQSPNQM NEVAPPPSVE EVMRLCQRRL YKDAIELLDK GAMPDRECFV 240
  241 LLFESCANLK SLEHSKKVHD HFLQSKFRGD PKLNNMVISM FGECSSITDA KRVFDHMVDK 300
  301 DMDSWHLMMC AYSDNGMGDD ALHLFEEMTK HGLKPNEETF LTVFLACATV GGIEEAFLHF 360
  361 DSMKNEHGIS PKTEHYLGVL GVLGKCGHLV EAEQYIRDLP FEPTADFWEA MRNYARLHGD 420
  421 IDLEDYMEEL MVDVDPSKAV INKIPTPPPK SFKETNMVTS KSRILEFRNL TFYKDEAKEM 480
  481 AAKKGVVYVP DTRFVLHDID QEAKEQALLY HSERLAIAYG IICTPPRKTL TIIKNLRVCG 540
  541 DCHNFIKIMS KIIGRVLIVR DNKRFHHFKD GKCSCGDYW

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..158] PSI-BLAST 7.30103 Sec24
    2 View Details [159..231] deduced N/A No confident structure predictions are available.
    3 View Details [232..579] PSI-BLAST 8.0 The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.57

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle