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Protein Overview: gi|9758749, gi|2...

General Information:
Name(s) found: gi|9758749 [NCBI NR]
gi|28973201 [NCBI NR]
gi|26449886 [NCBI NR]
gi|15241154 [NCBI NR]
Description(s) found:
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  • gi|9758749|dbj|BAB09113.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
  • gi|28973201|gb|AAO63925.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|26449886|dbj|BAC42065.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15241154|ref|NP_200433.1| nucleoside-triphosphatase/ nucleotide binding [Arabidopsis thaliana] [NCBI NR]
  • (Q9FH17) Similarity to unknown protein (Hypothetical protein) [athaliana3702.FASTAC.txt]
  • unknown protein [Arabidopsis thaliana]gi|9758749|dbj|BAB09113.1| unnamed protein product [Arabidopsis thaliana]gi|28973201|gb|AAO63925.1| unknown protein [Arabidopsis thaliana]gi|15241154|ref|NP_200433.1| expressed protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Expressed protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | nucleoside-triphosphatase/ nucleotide binding | chr5:22772097-22775018 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • nucleoside-triphosphatase/ nucleotide binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unnamed protein product [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr5:22754871-22757792 FORWARD LENGTH=973 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Nucleoside-triphosphatase/ nucleotide binding protein OS=Arabidopsis thaliana GN=At5g56220/K24C1_3 PE=2 SV=1 [ARATH-contam.fasta]
  • P-loop containing nucleoside triphosphate hydrolases superfamily protein OS=Arabidopsis thaliana GN=At5g56220 PE=2 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 973 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IEA]
    Biological Process: NONE FOUND
    Molecular Function: nucleotide binding [IEA]
    nucleoside-triphosphatase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKGIEEEASL VGLTIRTSSP ASSSSKKGKE DLLQANNNAS DSSPSIKNSP FYSPSLVSPP  60
   61 SSAFVSALQS PYISPRATTP SITTHKPSPP LSYKGSQSDD VPSSSYTPPS DQYEFSDEQP 120
  121 SDRKLKLSAS CTPDPAPPRI SFSFPVPRVS LAKVSVSSPA TNTKLRSSDV FIGFHGQNPN 180
  181 LVRFCKWLKS ELELQGIACF VADRAKYSDT QSHEIADRVI CSVTYGIVVV SCSSLLNYLS 240
  241 LEEVRFFAQK KNLIPIFYGT GPSEIMGLLN CNAIDKECKE AIDGLIKSHE FKLEANESNW 300
  301 RSCVGKTATI LRAKLGRKSV ADKEIVEGID ELPFPRNRSF LGREKEIIEM EMALFGNGEY 360
  361 LESTTPSTRG EASGQSEGLA DEESDVVPTR NGKFISLELG RCSDSRSEAW SDPNGGKNSL 420
  421 KRLLKTKKCR NNSNCKSSTS VVCVNGVPGI GKTELALEFA YRYSQRYKMV LWVGGEARYF 480
  481 RQNLLNLSFS LGLDVSADAE KDRGRLRSFD EQEFEAFKRI KRELFRDMPY LLIIDNLEIE 540
  541 KDWWEGKDLN DLIPRNTGGT HVLITTRLPK VMTFDTVQLS ILPSSDAMVL LRGRRKKDYP 600
  601 VEEVEVLKLF DEKLGRLSYG LWVVGSLLSE LAILPSALFE AVNKVQIEER SASPFLNLND 660
  661 EQYCKSNPFV AKVLAFSLAV LEQAEGNRNL LSLKMLLVGA WFAPVPIPVN LLAAAAKNMP 720
  721 TGGNRFSKWN KCLSHTFAWC GGCGLGRRSE EDAAFLLVRL GLARLTNRQP GCWIQFHPIT 780
  781 QTFARRRDYI LAPKATVQGV RKIDNPLLNL DHLWASAFLV FGFKSEPPLV QLQAMDMVLY 840
  841 IKRTALPLAI TAFTTFSRCN SALELLKVCT NVLEEVEKSF VSQIQDWRQG SLCWKKKTNK 900
  901 KVDEYVWQDV TLLKALLLET RAKLLLRGGH FDSGEELCRT CISIRTVMLG HNHDLTLAAQ 960
  961 ETLAKLVRMR SKI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..162] MSA 16.170997 View MSA. No confident structure predictions are available.
    2 View Details [163..296] FFAS03 2.36 Toll-like receptor 1, TLR1
    3 View Details [297..831] PSI-BLAST 14.39794 Structure of the apoptotic protease-activating factor 1 bound to ADP
    4 View Details [832..973] PSI-BLAST 15.69897 The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.166909062418251 bayes_pls_golite062009
    3 No functions predicted.
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.59

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle